Protein

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Genbank accession
YP_009278774.1 [GenBank]
Protein name
virion structural protein
RBP type
TSP
Evidence DepoScope
Probability 0,51
Protein sequence
MGFYNGTAMELLCQQVIRDNPSMAGRLTPDAVTVNGTAVARNANGRNTQITFVGIPGKGFHGELTLSYDRINLTTFTGGLYVPVEIAASAVTYADALPQLNELLGLNLSRDDLATPDAVFTGGIFPVNITIAVKSGSFCYTGALRLTWQRQPSMYYPESGPGPTGLRVGDEQAGYFGVVPAAEMFTAQALVNAIMAGTGVDVTVTATARDWMKFFFRGKVLFIPKMNMPGTSWDNYYKAGSAYGSDDPNGPLYPGTDKVVVEQNKIISNVVKGKAHYFHHRLPRGSTSILQAVSLTGEDYGLVAKVLGGEWGQETGTNIGGNTYFISQHIYNLSQPEYCSIFSMDGKYFNAGVAKANTYNYVPVLEYVNPNDVLLPLTDITGRYNMVVKPATVESVPLTSELVPIVPLAPMTTKLTSAPTTVSNEDRLLPIAPLYVSTLHLTPAPVTVTLRKPGTKTALNDTNGVLGDFK
Physico‐chemical
properties
protein length:470 AA
molecular weight: 50570,02820 Da
isoelectric point:6,10123
aromaticity:0,09574
hydropathy:-0,02383

Domains

Domains [InterPro]
IPR057701
STR
1–150
IPR057701
IPR057701
STR
1–145
IPR057701 DC_0860
YP_009278774.1
1 470
Architecture
STR
STR 1-444 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009278774.1
1 470
Domain Start End Length (AA) Confidence
N-terminal 1 148 148 0,8766
Central domain 149 347 200 0,5158
C-terminal 348 470 122 0,0908
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-148
Central
149-347
C-terminal
348-470

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage vB_EamM_Kwan
[NCBI] 		1883374 Uroviricota > Caudoviricetes > Chimalliviridae > Wellingtonvirus wellington >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009278774.1 [NCBI]
Genbank nucleotide accession
NC_031010 [NCBI]
CDS location
range 132709 -> 134121
strand +
CDS
ATGGGGTTTTATAATGGAACCGCGATGGAGTTACTCTGCCAACAGGTCATCCGTGACAATCCCAGTATGGCGGGGAGGCTTACTCCTGACGCTGTCACCGTCAATGGGACAGCGGTCGCTCGTAATGCCAATGGGCGCAATACCCAAATCACGTTTGTTGGTATCCCGGGGAAAGGATTCCACGGAGAGTTAACGCTGTCTTACGATCGTATTAACTTGACAACGTTTACCGGCGGGTTGTACGTGCCGGTAGAAATTGCGGCATCGGCGGTCACGTACGCCGATGCCTTACCGCAACTTAATGAGTTGCTCGGCTTGAACCTCAGTCGCGACGATTTGGCTACACCAGATGCTGTGTTCACCGGTGGGATATTCCCAGTCAATATCACCATAGCCGTGAAGTCGGGGTCGTTCTGTTACACGGGCGCGCTGCGACTGACGTGGCAACGGCAACCGTCTATGTACTATCCTGAATCTGGACCCGGACCAACGGGGTTGCGTGTAGGGGATGAACAAGCCGGTTATTTTGGTGTCGTTCCTGCGGCAGAAATGTTTACCGCGCAAGCGCTTGTCAACGCGATTATGGCCGGTACCGGCGTTGACGTCACCGTGACTGCCACCGCGCGCGACTGGATGAAGTTCTTCTTCCGCGGTAAAGTGCTGTTCATTCCGAAAATGAACATGCCCGGCACCTCATGGGATAACTACTATAAGGCCGGGTCAGCGTACGGCAGTGACGACCCTAACGGTCCACTTTATCCGGGCACCGATAAGGTGGTGGTGGAGCAGAACAAAATCATCTCGAATGTGGTGAAAGGTAAAGCACACTACTTCCACCACCGACTGCCACGTGGCTCGACTTCAATTCTGCAAGCCGTTTCACTGACCGGGGAAGATTACGGTCTGGTTGCGAAAGTGTTGGGTGGCGAATGGGGCCAAGAGACCGGGACGAATATCGGCGGGAATACTTATTTTATCTCGCAGCACATTTACAACCTCAGTCAACCTGAATATTGTTCAATATTCAGCATGGACGGAAAGTATTTCAATGCCGGGGTGGCAAAGGCGAACACTTACAACTACGTACCGGTGCTGGAGTATGTCAATCCGAACGATGTCCTGCTGCCGTTGACGGATATCACCGGAAGGTACAACATGGTGGTGAAACCCGCGACCGTTGAGTCTGTGCCGTTGACTAGCGAGTTGGTTCCGATTGTGCCGTTAGCCCCAATGACGACCAAGCTGACCAGCGCACCAACAACCGTCAGTAACGAAGACCGTCTGTTGCCAATCGCGCCGCTGTACGTCTCAACGCTCCACTTAACCCCAGCCCCTGTTACCGTCACGCTGCGTAAACCGGGTACCAAAACAGCGCTTAACGATACCAACGGTGTCCTTGGCGACTTTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c6056fd9465e24e7b3cf3da03dec2432e9a90d5ae272f548fa565f5e904843f6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5989
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50