Protein

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Genbank accession
YP_009030300.1 [GenBank]
Protein name
long tail fiber, distal subunit
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,71
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MANNLSAIKFKRRISGAAPTAAQIQRGELFLHLGNRTIYTKNESDQVIELGVAGAGGTIGGDLTVNGKLTVNQSTELKGALSAGGTTLSWLDVNQNLKVLGNTTLTGELTALNGQIKVAMKGPDPYIGFSEPNTMLRSNANGLLVIGAKSTDAQQRAIIFRPQGESAPGGESHIKSDGSFNIPGLNVANATVLKDLTTSGNVTTNGRFDAKGAFTVALGASFGSTVKSSGILTVGVGGERVQIHPGNNASIKFYGGNAIRADIFGMTSGANAIQIRPGSNSTNDFNFGMDGTLSSLALVARTRFDVHATADTEWSAVNFRGAVNSSQKRGLVFADANGAVGFNNAKGSQATWTNDNGFIIGSGSLTVGNYAANGEQQEPGAKSYFRNKDWMYLEGTNVWQDPSLGWVRQVNGLRMDMKRPGAAWYTEDCTLQSDGLGSSATPVCCVCRWSSRNFRDDSCR
Physico‐chemical
properties
protein length:460 AA
molecular weight: 48457,53800 Da
isoelectric point:9,01598
aromaticity:0,07391
hydropathy:-0,26304

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009030300.1
1 460
Domain Start End Length (AA) Confidence
N-terminal 1 32 32 0,9298
Central domain 33 231 200 0,1529
C-terminal 232 460 228 0,9069
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-32
Central
33-231
C-terminal
232-460

Taxonomy

  Name Taxonomy ID Lineage
Phage Serratia phage PS2
[NCBI] 		1481112 Uroviricota > Caudoviricetes > Muldoonvirus >
Host Serratia marcescens
[NCBI] 		615 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009030300.1 [NCBI]
Genbank nucleotide accession
NC_024121 [NCBI]
CDS location
range 154958 -> 156340
strand +
CDS
ATGGCTAACAATTTAAGCGCTATCAAATTCAAACGAAGAATAAGCGGAGCTGCTCCTACAGCAGCTCAAATTCAACGAGGCGAACTATTCCTTCACCTCGGCAACAGAACAATTTATACAAAAAATGAAAGTGACCAAGTAATTGAACTAGGTGTTGCAGGAGCTGGTGGTACTATAGGTGGAGATTTGACAGTCAATGGAAAATTGACTGTCAACCAAAGCACTGAATTAAAAGGTGCCTTATCCGCTGGTGGAACTACTCTTAGTTGGTTGGATGTAAATCAAAACCTCAAGGTTCTTGGCAACACCACGTTAACAGGTGAATTGACTGCTCTTAATGGTCAAATAAAAGTTGCCATGAAAGGTCCAGATCCATATATTGGATTCTCTGAACCAAATACGATGTTGCGTTCTAACGCCAATGGTTTGTTGGTTATCGGTGCCAAAAGTACTGATGCCCAGCAACGTGCTATTATTTTCAGACCTCAAGGCGAATCTGCCCCAGGTGGCGAAAGTCATATCAAATCTGATGGTTCATTTAACATTCCTGGTCTGAACGTCGCAAACGCTACAGTTCTTAAAGATCTGACTACTAGCGGTAACGTGACCACCAACGGCAGATTCGACGCTAAAGGTGCATTCACTGTCGCTTTAGGTGCATCATTTGGATCTACAGTCAAATCCAGCGGAATCCTTACCGTTGGTGTTGGCGGGGAGCGAGTTCAAATACATCCAGGAAATAACGCTTCTATTAAATTTTATGGCGGCAATGCTATAAGAGCTGACATTTTCGGAATGACTTCTGGCGCAAATGCTATACAAATTCGTCCAGGCAGTAATTCTACGAATGACTTCAATTTCGGCATGGATGGAACACTTTCTTCTTTGGCTTTAGTAGCACGAACTCGATTCGATGTCCATGCTACAGCTGATACAGAATGGTCAGCCGTCAACTTCAGAGGAGCTGTTAACTCGTCTCAGAAACGAGGGTTAGTTTTCGCCGACGCTAATGGCGCAGTAGGTTTCAACAACGCTAAAGGTTCTCAAGCTACATGGACAAATGACAATGGCTTTATTATAGGTTCTGGATCATTGACCGTAGGTAACTATGCTGCAAATGGTGAACAGCAAGAACCTGGAGCTAAATCTTATTTCAGAAATAAAGATTGGATGTATCTAGAAGGAACCAATGTTTGGCAAGATCCTAGTTTAGGATGGGTGCGTCAAGTCAACGGTTTAAGAATGGACATGAAGCGGCCAGGAGCAGCTTGGTATACCGAAGATTGCACTTTACAATCTGATGGGTTGGGGTCAAGTGCGACGCCGGTTTGTTGTGTATGCCGATGGAGCTCAAGGAATTTTCGAGATGACTCATGTCGGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
cdc336af5198ab0d80363177f2e633d1dfca0cf961f13311fbf2cfd8425e5fc6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6376
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50