Protein

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Genbank accession
YP_009188663.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 0,71
Protein sequence
MLHALIGTHRSNAVAELNSWGWIWVGTLDSRDGDNPTYWNNATPGIVLTLAMASDHVTVESVTLSAAHHNLIGATCCG
Physico‐chemical
properties
protein length:78 AA
molecular weight: 8313,22980 Da
isoelectric point:5,51261
aromaticity:0,06410
hydropathy:0,13205

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009188663.1
1 78
Domain Start End Length (AA) Confidence
N-terminal 1 59 59 0,2032
Central domain 60 67 9 0,0111
C-terminal 68 78 10 0,9963
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-59
Central
60-67
C-terminal
68-78

Taxonomy

  Name Taxonomy ID Lineage
Phage Gordonia phage GMA3
[NCBI] 		1647284 Uroviricota > Caudoviricetes > Gamtrevirus >
Host Gordonia malaquae
[NCBI] 		410332 cellular organisms > Bacteria > Bacillati > Actinomycetota > Actinomycetes > Mycobacteriales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009188663.1 [NCBI]
Genbank nucleotide accession
NC_028668 [NCBI]
CDS location
range 69410 -> 69646
strand -
CDS
ATGCTGCACGCACTTATTGGCACCCACCGCTCGAACGCTGTGGCCGAACTGAATTCTTGGGGTTGGATTTGGGTTGGCACGCTCGACTCTCGGGACGGCGATAATCCGACCTACTGGAACAACGCCACGCCTGGAATTGTCCTCACACTCGCCATGGCCAGCGACCACGTAACCGTTGAATCGGTGACACTGTCAGCGGCGCATCACAATCTGATTGGTGCGACATGCTGTGGATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
aae3460103dddc23bd5bdc03665f8cd52f5d8b8dab4dea588010c9c33ec7db9c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6575
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50