Protein

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Genbank accession
QQO89851.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 0,71
Protein sequence
MALFMGRKPSDNRPLLHVTSGSESISQLHGAPIASTLFHSDIPYLAISKVIEVTQFKHVEARQSGTRYYHYYEPVIPQEVWNYMNQGYLMCGSNVSYHPNYVEHRPIGVYSSDWSPTSADIFIGNFQGSMGGGHPYGGISSGWAPIDMHDMANADETVDQAVRIQSDSFITDYPTSKSYYRNNWSISGLAPKTKNYKRVIQSPNVSASASRATSASFTKENKINRALFANGTTSSRMRIIRPTASAPTTLTYSSTNPSDSNFKLIIYIFNVKYNSSNKLEHVKPDISDGIRISREDMVVGDLAMKNGMFITDPAPNEDLLDSTISSHKYKVKYPFFDRLVKGLTLAQLADYPFPYCRFFKSSNGNWSVNEGTGWYNIDTILLVHSPSALLGTGVSLDFSADEIKYKGSKGEYLIASKARKYTPFVLGGDSAITAVFPAETNTFAQLKQGTSFKKEVIDFGPSDWRRVLNPDQCGNYYKTVVKQRIKLPPGSTNKSYLSVHVSSPYLKGEASSTIAGKTSKMNVGIDGYSGWSNLQYMIFSKDHPDKEAVVSDIGFSTMRDVSKTSSDRSWWYFSSTGNKMQAVRIQYKIRVNWVRNELELVGWYKLTNAALQCAEYSGKTTYYNKLGERDVTYKTPEVRLGFYILGTA
Physico‐chemical
properties
protein length:648 AA
molecular weight: 72457,79250 Da
isoelectric point:9,16555
aromaticity:0,12037
hydropathy:-0,42207

Domains

Domains [InterPro]
IPR059609
RBD
1–634
IPR059609
QQO89851.1
1 648
Architecture
RBD
RBD 1-634 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QQO89851.1
1 648
Domain Start End Length (AA) Confidence
N-terminal 1 81 81 0,5086
Central domain 82 280 200 0,3992
C-terminal 281 648 367 0,9076
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-81
Central
82-280
C-terminal
281-648

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage ABurr
[NCBI] 		2801532 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio harveyi
[NCBI] 		669 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QQO89851.1 [NCBI]
Genbank nucleotide accession
MW344056 [NCBI]
CDS location
range 7616 -> 9562
strand -
CDS
ATGGCACTTTTTATGGGCAGAAAGCCCTCAGATAATAGACCACTATTACATGTAACTAGTGGCAGCGAGTCTATTTCTCAACTACATGGGGCACCTATAGCATCAACGCTATTTCACTCAGATATACCATACTTAGCAATATCAAAGGTTATAGAGGTAACTCAATTCAAGCACGTAGAGGCTAGACAATCGGGTACTAGATACTATCACTACTATGAACCGGTTATACCACAAGAGGTATGGAACTACATGAACCAAGGATATCTAATGTGTGGCTCAAACGTATCATACCACCCTAACTACGTAGAGCATAGACCTATAGGTGTATATTCTAGTGACTGGTCCCCTACTTCCGCAGATATATTTATAGGTAATTTTCAAGGTTCTATGGGAGGAGGACACCCTTACGGTGGTATTTCCAGTGGTTGGGCACCTATAGATATGCATGATATGGCTAATGCTGACGAAACGGTGGATCAGGCAGTGCGTATCCAAAGTGATTCATTTATAACAGACTACCCTACTAGTAAAAGTTACTATAGAAATAACTGGAGCATATCTGGTTTAGCACCGAAAACTAAGAACTATAAAAGAGTAATTCAGTCTCCAAATGTGTCTGCATCAGCTAGTAGAGCTACATCAGCTAGTTTCACTAAGGAAAACAAAATAAATAGAGCACTATTCGCTAATGGTACTACATCATCTAGGATGCGTATTATTAGACCTACAGCATCAGCTCCAACTACTCTAACTTACTCATCTACTAATCCATCAGATAGTAACTTCAAATTAATTATTTATATATTTAATGTAAAATATAATTCTAGCAACAAACTAGAGCATGTGAAGCCTGATATAAGTGATGGTATACGCATATCTCGTGAAGATATGGTAGTAGGTGATTTAGCTATGAAAAACGGAATGTTCATAACTGACCCTGCTCCAAATGAAGATTTACTAGATAGTACAATTTCTAGTCATAAATATAAAGTCAAGTATCCGTTTTTTGACAGGCTAGTAAAGGGTTTGACGTTGGCACAACTAGCAGACTACCCATTCCCTTACTGTAGATTTTTTAAGAGTAGCAATGGTAACTGGAGTGTTAATGAGGGTACAGGCTGGTATAACATTGATACTATACTACTAGTGCACTCCCCGTCAGCGCTTCTTGGGACTGGCGTATCACTAGACTTCTCGGCGGATGAGATTAAATATAAAGGAAGTAAAGGTGAATATTTAATAGCATCAAAGGCTAGAAAGTATACACCTTTTGTACTTGGCGGTGATTCGGCTATTACGGCGGTATTTCCAGCTGAAACCAATACCTTCGCACAATTAAAACAAGGTACTTCATTCAAGAAAGAGGTAATAGACTTCGGGCCATCAGATTGGAGACGTGTTCTGAACCCTGACCAATGTGGGAATTACTATAAAACAGTGGTGAAACAAAGAATAAAGCTACCACCAGGCAGTACTAATAAGAGCTATTTATCAGTGCATGTTAGCTCACCATACTTGAAGGGGGAGGCGAGTAGCACGATTGCTGGTAAAACGTCTAAAATGAATGTAGGTATTGATGGATATTCCGGCTGGTCAAACTTACAATACATGATATTTAGTAAGGATCATCCTGATAAGGAAGCGGTTGTATCTGATATAGGATTCAGCACAATGCGAGATGTATCAAAAACAAGCTCGGATAGGTCTTGGTGGTATTTCTCTAGTACTGGTAATAAGATGCAGGCTGTAAGAATACAATATAAGATACGGGTAAATTGGGTGCGCAATGAGCTAGAATTGGTAGGGTGGTATAAACTTACTAATGCTGCCCTACAGTGTGCTGAGTATTCTGGCAAGACAACATATTATAATAAACTTGGCGAGAGGGACGTAACGTACAAGACACCTGAGGTACGGTTAGGTTTCTATATATTGGGTACGGCATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
cd1b2f79d25990b2958f44b104b719b085b14c5a4e00c6beda30cb69efd94242
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,2731
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50