Protein

Genbank accession
YP_009792028.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,92
TF
Evidence Phold
Probability 1,00
Protein sequence
MAYTEIAMAVGNSPEILARNVKMMISSGFQPYGDVQMLSGTLFGMKMAKGTANNVEDFMVTSDTTIQGLVNRVNRYLAQGWRRFGNAHFEDGAYLSALAKGDFVSDEEGGSGEAGPQGPVGPQGPAGPAGAIGPQGPQGPTGATGPAGAAGAKGETGPAGPVGPQGPQGETGEAGPQGPIGATGAAGPAGPKGDKGDAGPVGPAGLTFRGMYDAATAYVKDDVVTFNNSSWFATAAVTGENPDVSDSWELLAAQGAPGPQGSAGPAGPTGPTGPAGIQGPQGERGLQGEQGPAGPQGLQGVAGAVGPQGPAGPQGERGLQGPTGPQGLQGVAGPASYNVASGVRSGLINQTDTDFIDIPGETTIRFALTGEKNATVAAKGLWVGVSNTGTSNIASIRHTAYQIDSLTTVAADKLKNYTAIVTSMPPGTALWNSVFKPGVFGVTSEHYVTTSPGATADSKCFKLTIVGIRNSSDALAGVYAYKVENLSEPLA
Physico‐chemical
properties
protein length:491 AA
molecular weight: 48910,64060 Da
isoelectric point:4,80343
aromaticity:0,06314
hydropathy:-0,23585

Domains

Domains [InterPro]
IPR050149
109–334
IPR050149
IPR008160
148–205
IPR008160 IPR036573 IPR008160
G3DSA:1.20.5.320
181–228
G3DSA:1.20.5.320 G3DSA:1.20.5.320
IPR003610
212–251
IPR003610
YP_009792028.1
1 491
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage Sf12
[NCBI] 		2024315 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009792028.1 [NCBI]
Genbank nucleotide accession
NC_047848.1 [NCBI]
CDS location
range 34681 -> 36156
strand -
CDS
ATGGCTTACACAGAAATTGCTATGGCAGTAGGGAATTCACCTGAAATCTTAGCCAGAAACGTAAAAATGATGATTTCATCAGGATTCCAGCCATATGGCGACGTGCAGATGCTGAGCGGCACCCTCTTTGGCATGAAGATGGCGAAGGGAACAGCAAACAACGTTGAAGACTTCATGGTGACATCCGATACCACAATTCAGGGATTAGTTAACAGGGTTAACAGATATCTAGCCCAGGGCTGGCGCAGGTTTGGCAATGCCCACTTCGAAGATGGTGCTTATCTTTCAGCGCTGGCGAAAGGTGATTTTGTAAGTGATGAAGAAGGAGGCTCAGGTGAAGCAGGCCCACAAGGTCCGGTTGGTCCACAGGGTCCAGCGGGCCCGGCAGGAGCTATTGGTCCACAGGGTCCTCAAGGCCCAACAGGTGCTACCGGCCCGGCAGGCGCGGCAGGTGCTAAAGGCGAAACTGGTCCAGCTGGCCCCGTAGGCCCGCAAGGTCCTCAAGGTGAAACTGGCGAGGCTGGTCCGCAAGGCCCTATCGGTGCAACTGGCGCAGCAGGTCCTGCTGGCCCTAAAGGTGATAAAGGTGATGCGGGCCCAGTTGGTCCGGCAGGCTTAACATTCCGCGGGATGTACGACGCAGCGACAGCTTACGTTAAAGATGACGTTGTTACATTCAATAACTCAAGCTGGTTTGCTACCGCCGCCGTGACCGGAGAAAATCCAGATGTTAGCGATTCCTGGGAGTTACTGGCCGCACAGGGTGCTCCAGGCCCACAGGGTTCCGCTGGTCCAGCAGGCCCAACTGGCCCGACAGGTCCGGCAGGTATTCAAGGCCCACAAGGCGAGAGGGGCCTGCAAGGTGAGCAAGGCCCAGCTGGCCCGCAAGGCTTACAAGGTGTAGCTGGTGCAGTTGGACCACAAGGCCCGGCAGGCCCGCAGGGTGAGCGTGGATTGCAGGGCCCTACGGGACCTCAGGGCTTACAGGGGGTGGCTGGTCCAGCCTCTTATAACGTAGCTTCAGGCGTAAGGTCAGGGTTGATCAATCAGACGGATACTGACTTTATAGATATACCTGGAGAGACAACAATAAGGTTCGCTCTTACCGGAGAGAAGAATGCGACAGTTGCCGCTAAGGGGCTGTGGGTTGGTGTTAGTAATACCGGTACATCAAACATCGCTTCAATAAGGCACACTGCATACCAGATTGACTCACTCACTACAGTTGCAGCTGATAAGTTGAAAAACTACACAGCGATAGTAACAAGCATGCCTCCTGGGACTGCTCTTTGGAATAGCGTGTTCAAGCCAGGAGTTTTTGGAGTCACATCTGAGCACTACGTAACCACATCACCAGGAGCTACAGCTGACTCTAAATGCTTCAAGCTTACAATAGTTGGCATAAGGAACTCATCCGATGCCTTGGCTGGCGTTTACGCTTATAAGGTGGAAAACTTAAGCGAACCTCTCGCATAG

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
4036b8da086d3ae50ab612f736788841edcbdafbd31983ce72cfcc8960c8ab8e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6390
Evidence 0,6390
Download PDB

Literature

Title Authors Date PMID Source
The isolation and characterization of 16 novel Shigella-infecting phages from the environment Doore,S.M., Schrad,J.R., Dover,J.A. and Parent,K.N. 2020-09-29 — GenBank