Protein

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Genbank accession
AGH56668.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MSHPEIYYRPEGSFGPICDALVVLDDDLGRGALRLQDDDGDGPEDPDEDVFGPYEDGKVTQPVRRIVCKKNPDTGELYNCRVEYTPEGGDKWFPEPPCYFEIDGECYNFPEAAAKEFGLQDDFFVPPLNPETCLPFRNDLNIAPITRVREDGSTYKLYPVERSNPVTFPVTSGAVEGASLDVKFSDDGNSIVVRGDSTDSGTAVCTLSWDDDPTNNGTALGKISIPVTEVDTNSAPTTWTQSNIYDAASLPGASLTGVALLYFGNGIGEIGQFAPPDGNTSGTQYFAFGTPTTSPFSTQQTLRRVEFTADLTGSRTLFVHAISGNDRNGGERINNIGEGLRVIWPDNSEQVLLPSRQDWVADTGGSYSEYDDRYDNWSLLNVNIPEQYRTTGVSIKLQQNIVSGPEFQREDIQVYFNSAGDLVVDGNGDAEVTLKFAWDDNPNQHGVALGTWSANGVTFTQTTGIPEGNDTQTMNVVAGNVYSATITGNPGGFTVDSDDEGNTRQVLCFKDNDGDDCNATLEIHKVKKGVNTIVENNPNGGDALGVAAVGWGGAASFEQAERGSESHKFNVSANQTYPITFTDLNPANTTIKVRDDNTRLIFYDGAGTDTNAEFFIDSVENTVGSTAAGYWSDVGNRYAVWVNPAVCTLPCLTQTITYQITFPATDKYFFEFGCDDNAKVFFGEEEVPILDVAGGIFRSGALSTPYVVEKTVTAGTHTVVVVITNSNPRGNERTVDAVFIPYSAVRRAANNPDGYTDALGTFGLLDYTNPARYFSVISRSVAEEYITGRFGRTETITGQYVFRGRGPDKNGHLSHVNYYVSQGGSRSDTTLNATAWAATKQNIYDNYVSGGEINEGNVIRTYYPDCSTDSPVGKSGTDTNDWALDWGKNPGGYYMRICRGTPCSDGESLDWVKSGPHNAWGDFMDEYAVFASNFETYHGIPQTITYSIDIPVDGTYIIEYAADDNMQLDWDGTNIINHGGFTTSTTSTFNFTAGTHDLKMQVTNQANSANADNWDKNPAGGAWKITKQTPSINVVFNSDGGVDVLGVGKAAVTFDFEWDDNPNDDGKALNYWTIPGVKFSQGNATTGSASKTVVLEAGSYRPTIRGNTGGFVLQNNNSEIHFRDQDGTDTNAQISITSIEQIIRSSTDLDKAGENNLIWHTRQDVLYDYIEIGS
Physico‐chemical
properties
protein length:1174 AA
molecular weight: 127731,83670 Da
isoelectric point:4,33303
aromaticity:0,10562
hydropathy:-0,46746

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AGH56668.1
1 1174
Domain Start End Length (AA) Confidence
N-terminal 1 245 245 0,7907
Central domain 246 708 464 0,6552
C-terminal 709 1174 465 0,0606
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-245
Central
246-708
C-terminal
709-1174

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage Syn10
[NCBI] 		536472 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGH56668.1 [NCBI]
Genbank nucleotide accession
HQ634191 [NCBI]
CDS location
range 154271 -> 157795
strand -
CDS
ATGAGTCACCCTGAAATTTATTATAGACCTGAAGGAAGTTTTGGTCCTATCTGTGATGCACTTGTTGTCTTGGACGATGATCTTGGACGAGGTGCATTGCGTTTGCAGGATGACGATGGTGATGGACCTGAAGATCCTGATGAGGATGTATTTGGACCATATGAAGATGGTAAGGTTACTCAACCAGTCAGAAGAATTGTATGTAAGAAAAATCCTGATACGGGAGAGTTATATAATTGTCGTGTAGAATATACACCTGAAGGTGGGGACAAATGGTTTCCAGAACCACCATGCTACTTTGAAATTGATGGTGAATGCTATAATTTTCCCGAAGCAGCGGCAAAGGAATTTGGATTGCAAGATGATTTCTTTGTTCCTCCACTAAATCCAGAAACCTGTTTGCCATTTAGAAATGATCTAAACATTGCACCTATCACTAGGGTCCGTGAGGATGGATCGACATATAAACTATATCCTGTAGAAAGATCAAACCCTGTTACCTTTCCTGTCACCTCTGGGGCAGTAGAAGGAGCATCACTTGACGTTAAATTTAGTGATGATGGCAATTCTATAGTTGTTAGAGGTGATAGCACTGACAGTGGCACTGCTGTTTGTACACTGAGTTGGGATGATGATCCAACTAACAATGGCACTGCACTTGGTAAAATTAGTATTCCTGTTACTGAAGTTGATACTAATAGTGCTCCTACAACATGGACACAAAGTAATATTTACGATGCTGCTTCTCTGCCTGGTGCATCGCTGACGGGTGTAGCACTACTTTACTTTGGTAATGGTATTGGTGAGATTGGTCAGTTTGCTCCACCAGACGGTAATACTTCTGGCACACAATACTTTGCTTTTGGCACACCTACTACGAGTCCATTCAGCACACAACAGACACTGAGAAGAGTTGAATTTACTGCTGATCTTACTGGATCTAGGACATTATTTGTCCATGCTATTTCTGGTAATGATAGAAATGGTGGTGAAAGAATTAATAATATTGGAGAGGGTCTGAGAGTTATTTGGCCTGACAATAGTGAGCAAGTTTTACTTCCATCTAGACAGGACTGGGTAGCAGATACTGGTGGAAGTTATTCAGAGTATGATGATAGGTATGATAATTGGTCTTTGCTCAATGTAAATATTCCTGAGCAGTATCGGACAACTGGTGTTTCTATTAAACTACAACAAAACATTGTATCTGGACCTGAGTTTCAGCGTGAAGACATTCAAGTTTACTTTAATTCTGCTGGCGATCTGGTTGTTGATGGTAACGGTGATGCTGAGGTGACACTTAAGTTTGCATGGGATGATAACCCAAACCAGCATGGTGTTGCTTTAGGCACATGGTCTGCAAATGGTGTTACATTCACACAAACTACAGGTATTCCTGAGGGCAATGACACACAGACAATGAATGTTGTTGCTGGTAATGTTTACAGTGCAACTATCACTGGAAACCCTGGTGGATTTACTGTTGATTCTGATGATGAAGGTAACACTAGACAGGTGCTTTGTTTCAAAGATAATGATGGTGATGATTGTAATGCCACCTTAGAAATTCACAAAGTAAAAAAAGGTGTTAATACTATTGTAGAAAACAATCCTAATGGTGGTGATGCTTTGGGTGTTGCTGCTGTTGGTTGGGGTGGTGCTGCATCTTTTGAGCAAGCAGAAAGAGGATCTGAGTCACATAAGTTTAATGTTTCTGCAAATCAAACATATCCTATTACTTTTACAGATCTGAATCCTGCTAACACAACTATTAAAGTTAGAGATGATAATACTAGATTGATTTTTTATGATGGTGCTGGTACAGATACCAACGCAGAGTTTTTTATTGACTCTGTAGAAAATACGGTGGGATCTACAGCAGCAGGATACTGGTCTGATGTTGGCAATAGATATGCAGTGTGGGTTAATCCTGCTGTCTGCACACTTCCTTGCTTGACTCAAACAATTACATATCAAATAACATTCCCTGCTACTGACAAATACTTCTTTGAGTTTGGATGTGATGATAATGCCAAAGTTTTCTTTGGAGAAGAAGAAGTGCCCATTCTAGATGTGGCGGGAGGTATTTTTAGAAGTGGTGCATTGTCAACTCCTTATGTTGTAGAGAAGACTGTAACTGCAGGGACGCACACAGTTGTTGTAGTTATCACTAATTCAAACCCTCGTGGTAATGAAAGGACTGTAGATGCAGTTTTTATCCCATATTCTGCTGTTAGGAGAGCGGCAAATAATCCTGATGGATATACTGATGCTTTAGGTACATTTGGGCTCTTAGATTATACAAATCCTGCTAGATATTTTAGTGTCATTAGTAGATCTGTTGCTGAAGAATATATTACAGGAAGGTTTGGACGCACAGAGACAATTACTGGACAGTATGTCTTTCGTGGTAGAGGACCAGATAAGAATGGTCACCTTTCACATGTAAATTATTATGTTTCTCAAGGTGGATCTAGGTCTGATACAACATTAAATGCTACTGCGTGGGCAGCAACAAAGCAAAACATCTATGATAATTATGTAAGCGGTGGTGAAATCAATGAAGGAAATGTCATCAGAACATATTATCCAGACTGCTCCACAGATAGTCCTGTTGGTAAATCGGGCACAGATACAAACGATTGGGCACTAGATTGGGGAAAGAATCCTGGTGGATACTATATGAGGATCTGTAGAGGAACACCATGTAGTGATGGTGAATCATTGGATTGGGTTAAGTCTGGTCCACATAATGCATGGGGTGATTTTATGGATGAGTATGCTGTATTCGCATCAAATTTTGAAACTTATCATGGCATTCCTCAAACTATCACTTATAGCATCGACATTCCCGTTGATGGCACTTATATTATTGAGTATGCTGCCGATGATAATATGCAACTAGATTGGGATGGGACTAATATTATCAACCACGGTGGATTTACTACTTCTACAACGAGCACTTTTAATTTCACTGCTGGTACTCATGATTTAAAAATGCAGGTGACAAACCAAGCCAATTCAGCTAATGCAGATAACTGGGATAAGAATCCTGCAGGCGGTGCTTGGAAAATCACAAAGCAAACACCATCTATCAATGTAGTTTTTAATTCAGATGGTGGTGTTGATGTCCTTGGTGTAGGAAAAGCAGCAGTTACTTTTGATTTTGAATGGGATGATAATCCAAACGACGATGGTAAGGCACTTAACTATTGGACTATTCCTGGAGTTAAATTTTCTCAGGGTAATGCAACTACTGGTAGTGCTTCAAAGACTGTTGTGTTGGAAGCAGGATCATACCGTCCAACTATTAGAGGAAACACTGGAGGATTTGTCCTTCAAAATAATAACTCTGAAATACATTTCCGAGATCAAGATGGCACAGATACTAATGCACAAATAAGTATTACTAGTATTGAGCAGATTATCAGATCCTCAACAGACCTTGACAAAGCAGGGGAGAATAATCTAATATGGCACACAAGGCAGGACGTACTCTATGACTACATTGAAATCGGATCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a7b296d9c48d12db4d2d6dc2f72804a3c9b93fd2dfc70ef55cdeaeba879c467a
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2913
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Cyanophage Syn10 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank