Protein

View in Explore
Genbank accession
AJW76925.1 [GenBank]
Protein name
chitin binding protein
RBP type
TF
Evidence RBPdetect
Probability 0,53
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MFEALNIDTNFLNYYRHKTKYKKILFYAKIDGVNWYDLSDYVQRVKTNNKIQLLNNAVIDTATITVKNENNAFTSTQYNDVFDPTVGKINGTINDGYLNKVWEVKILVEVTDGINTIQIPVFHGWKTQRAIKEKHKKAEIELKDILWITTQKKLEYPLLYTQMTPNAIISDLLNRCGLDANYQDLQNLTTVFDVFIADKDRTYWQVIQKIVEATAGRISTTPDGKVIYRTRIENFIEPSPVITINQEDFKNYNLSNQKKYNRIKLESEGFEIGAITEAVIDTDLQGDNAIIAATKQGRFELEYTSDYIKNPDTTVFLTVYQGETLTSDNEAFTAGSDNGLIRLDELTAYPDKLILKITNLSSTVAYTIKHVKFNAIPIKKISLNNVIRPNLTNEPDSEIGLKSHYSSEAMLSNVADVVEDNLSKEINFNLQMNEFYPDIYAGNLVNLSISAKGISSGIFIIDKVEHSLIANKFETKLNLVEWKNINFDISNKEITQQIVSKEIQKPNVVKTVEEISGAVQELQTQTQEVDDRTNFLDRAEPSAPANLTLTTINENGLSFVKASWDANTETDLIGYELAWSYDGIDWNYIKTSETLVKFEVAGNKTVYAKVRALDAEGKKSVWSAVQQITSAKDEIPPAIPTLISVESLYAAAIVKLQEPQEEDFSHFLVIDGTNSFRSETTNIRIEMNPNTTKTIQIQAVDFSGNSSNSLQVEVASKSFSESEQEFSTLQTDVQNINDDVNLIQKMSSIKIPDGAIAYFPWSLFDVVNKIKPVGYDVELRDYESLNEETTTVIQRVDTNEGNITNLVAKTGINDLGDTETLYSKTTQNADNITNIVAKLSSNPDDPLQYSAIKQNADSITNVVAKLNSAPDDPTQYSAIKQNASQISSTVAEVSSIDADLADLNVASNRWSTFQQLVNEINLRVVAKDENGTLQATELSIQNGKIVIDANQFVVHGDATIDGTISGSKLIAGSITADKLIMQPAFGLPKGAIAYFTNSLVDEINQIMPVGYTEVNLAPTITLTPENAPEGSIIGDLMVADKIYANHMNVSQLSAITGNVGILNSGKIQGNTGTTEFDLDNDKISISNGDIEIGKGVLSDSSDGIKVNGKIEINDSSGNKSILSGTGIRQIYALTAIDQIDSAKSLSIPIYIPDNASGTTTGTGIARIIVKAEKFRAYSKGASSGGSSSVTSGSSLPTNMTVATGGATWLNIDVNIGDTFSADAAGSHTHSYSDWTYTNGYHSHTLKDDFSGTNSAGSHQHSFSGSTGSAGSHAHSIGVSQFNHTHDVSISDLNHTHSVSIPSHTHSLTYGIYESTATATITIKKGTTTLGTVATDNEITITNQTVSNGDKIEISADNLTRVQVYIFVEYLLQY
Physico‐chemical
properties
protein length:1373 AA
molecular weight: 150682,22100 Da
isoelectric point:4,81673
aromaticity:0,07575
hydropathy:-0,28776

Domains

Domains [InterPro]
DC_2198
ATT
1–540
DC_2198 IPR013783
IPR036116
STR
536–641
IPR036116
DC_0960
STR
542–725
DC_0960
AJW76925.1
1 1373
Architecture
ATT
STR
ATT 1-540 | STR 541-725 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Marinitoga camini virus 1
[NCBI] 		1629954 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Marinitoga camini
[NCBI] 		106262 cellular organisms > Bacteria > Thermotogati > Thermotogota > Thermotogae > Petrotogales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AJW76925.1 [NCBI]
Genbank nucleotide accession
KP836355 [NCBI]
CDS location
range 23568 -> 27689
strand +
CDS
ATGTTTGAAGCACTTAATATAGATACAAATTTTCTAAATTACTACAGACACAAAACAAAATATAAAAAAATATTGTTTTACGCAAAAATTGACGGTGTGAATTGGTATGATTTGAGCGATTACGTACAAAGAGTTAAAACAAATAATAAAATACAATTACTTAATAATGCGGTAATAGATACAGCAACAATAACGGTAAAAAATGAGAATAACGCTTTTACTTCTACGCAATACAATGATGTGTTTGACCCAACAGTTGGAAAAATTAACGGGACAATAAACGATGGCTATCTTAACAAAGTATGGGAAGTTAAAATATTAGTTGAAGTAACTGACGGAATAAATACAATTCAAATACCAGTTTTTCACGGTTGGAAAACACAAAGAGCTATAAAAGAAAAGCATAAAAAAGCGGAAATAGAATTAAAGGATATATTATGGATAACAACACAAAAAAAATTGGAATACCCATTATTATATACCCAAATGACACCAAATGCTATAATTTCGGATTTGCTTAATAGATGTGGATTAGATGCTAATTATCAAGATTTACAAAACTTAACGACTGTATTCGATGTATTTATTGCTGATAAAGATAGAACGTATTGGCAAGTAATTCAAAAAATAGTAGAAGCAACGGCGGGGAGAATAAGCACAACGCCAGACGGAAAAGTAATATATAGAACAAGAATTGAAAACTTTATTGAGCCAAGTCCTGTTATAACAATTAATCAGGAAGATTTCAAAAATTATAATCTTTCAAATCAAAAAAAATATAACAGAATAAAATTAGAAAGTGAAGGTTTTGAAATAGGAGCAATAACCGAAGCGGTAATTGATACAGACTTGCAAGGAGATAATGCGATAATTGCAGCAACAAAACAAGGAAGATTTGAGCTTGAATATACGAGCGATTATATCAAAAACCCTGATACAACAGTATTTTTGACAGTTTATCAAGGAGAAACGTTAACTTCAGATAATGAAGCTTTCACAGCTGGAAGTGACAATGGATTAATTAGATTAGATGAATTAACCGCATATCCAGACAAGTTAATCTTAAAAATCACAAATTTATCTTCGACTGTAGCTTATACGATTAAACATGTCAAATTCAATGCGATACCAATCAAAAAAATAAGCTTAAATAATGTAATAAGACCAAATTTGACAAACGAACCGGATTCTGAAATAGGCTTAAAATCTCATTATTCATCAGAGGCAATGCTTTCAAATGTCGCTGATGTAGTAGAAGATAATTTAAGTAAAGAAATTAATTTTAATCTACAGATGAATGAATTTTATCCGGATATTTATGCTGGAAATTTGGTAAATTTAAGCATATCGGCAAAAGGTATTTCAAGTGGAATTTTCATTATCGATAAAGTAGAGCATTCACTTATAGCAAACAAATTCGAAACAAAGTTAAACCTTGTAGAATGGAAAAATATAAACTTTGATATATCAAACAAAGAAATAACACAACAAATAGTTTCAAAAGAAATACAAAAACCTAATGTTGTAAAGACTGTAGAAGAAATTTCTGGGGCAGTTCAAGAGCTTCAAACACAAACGCAAGAGGTAGATGACAGAACGAACTTTTTAGATAGAGCAGAACCTTCAGCACCCGCTAATCTCACATTAACAACGATAAATGAAAATGGATTAAGTTTTGTAAAAGCATCTTGGGATGCAAATACAGAAACGGATCTTATAGGTTATGAACTTGCTTGGAGCTATGACGGTATTGATTGGAATTATATCAAAACATCAGAAACTCTTGTGAAGTTTGAAGTAGCAGGTAATAAAACAGTTTATGCAAAAGTTAGAGCATTAGACGCAGAAGGCAAAAAATCGGTATGGAGTGCAGTGCAACAAATAACAAGCGCAAAAGATGAAATACCACCAGCAATACCAACATTAATCTCTGTAGAAAGTTTGTATGCTGCAGCAATAGTGAAGTTGCAAGAGCCACAAGAGGAAGATTTTTCGCATTTTCTTGTTATTGACGGGACAAATTCTTTCAGAAGTGAAACAACAAATATTAGAATTGAAATGAATCCGAACACAACGAAAACAATTCAAATACAAGCGGTTGATTTTTCAGGAAATTCATCTAATTCATTGCAAGTAGAAGTTGCATCAAAGTCTTTTAGTGAATCAGAGCAAGAATTTTCTACTTTACAAACAGATGTTCAAAATATAAATGATGATGTAAATTTAATACAAAAAATGTCAAGTATAAAAATACCAGACGGAGCGATTGCGTATTTTCCGTGGAGCTTGTTTGATGTAGTAAATAAAATTAAACCAGTTGGATATGATGTTGAACTTAGAGATTATGAATCATTAAACGAAGAAACTACAACCGTTATTCAAAGAGTAGATACAAACGAAGGGAATATTACCAATTTAGTAGCGAAGACTGGAATAAATGATTTAGGAGACACAGAGACTTTGTATTCAAAAACAACACAAAATGCTGACAATATTACAAATATTGTAGCAAAACTCTCAAGCAACCCAGACGACCCTTTGCAGTATTCAGCAATAAAACAAAATGCTGATAGCATTACAAATGTTGTTGCGAAATTAAATAGTGCGCCAGATGACCCGACGCAGTATTCTGCGATAAAACAAAATGCGTCTCAAATTTCATCAACAGTTGCAGAAGTCTCTTCAATTGATGCTGATTTAGCGGATTTGAATGTAGCATCGAATCGTTGGAGTACGTTTCAGCAATTAGTAAATGAAATAAATTTAAGAGTTGTAGCAAAAGATGAAAATGGAACACTTCAAGCAACAGAACTTTCTATTCAAAACGGCAAAATAGTTATAGATGCAAATCAATTTGTCGTGCATGGAGATGCAACAATTGACGGAACAATATCAGGAAGCAAATTAATTGCAGGAAGTATTACAGCAGATAAATTAATAATGCAACCAGCTTTCGGACTTCCAAAAGGTGCTATCGCTTATTTTACAAATAGTCTTGTAGATGAAATTAACCAAATCATGCCAGTTGGATATACAGAAGTTAATCTTGCACCAACAATCACACTAACGCCTGAAAATGCGCCAGAGGGAAGTATAATTGGTGATTTGATGGTTGCAGATAAAATATATGCAAATCATATGAATGTTAGCCAATTGTCAGCAATTACAGGCAACGTCGGGATTTTAAATTCTGGAAAAATTCAAGGAAATACAGGAACAACAGAATTCGATTTAGATAATGATAAAATCTCAATAAGTAATGGAGATATTGAGATCGGGAAAGGAGTATTGTCAGATAGTTCTGATGGAATAAAAGTAAATGGAAAGATTGAAATAAATGATTCTTCAGGTAATAAAAGTATTTTGTCAGGAACAGGTATTAGGCAGATTTATGCTTTAACAGCAATAGACCAAATAGATAGTGCGAAAAGTTTATCGATACCAATTTACATCCCGGATAACGCTTCAGGAACAACTACAGGAACAGGAATAGCTAGAATAATAGTAAAAGCGGAAAAATTCAGAGCATACTCAAAAGGAGCATCTTCTGGAGGTAGTTCGTCAGTTACTTCGGGCTCGAGTCTCCCAACAAATATGACAGTAGCAACAGGTGGTGCAACTTGGTTGAACATAGATGTGAATATTGGAGACACTTTTTCGGCTGATGCAGCAGGGAGTCATACACATTCATACTCAGATTGGACGTATACGAATGGTTATCATAGCCATACTCTTAAAGATGATTTTTCAGGTACAAATTCTGCAGGTTCTCATCAACATTCATTTAGTGGTTCAACAGGAAGTGCAGGAAGTCATGCACATTCTATCGGTGTATCGCAATTTAATCATACGCATGATGTTTCAATTTCAGATTTAAATCATACGCATTCAGTATCTATTCCATCGCATACACATAGTTTAACGTATGGAATTTATGAAAGTACAGCAACAGCAACGATTACAATAAAAAAAGGAACAACAACTTTAGGAACAGTGGCGACTGATAATGAAATAACTATAACAAATCAAACTGTGTCTAATGGAGATAAAATAGAAATTTCAGCGGATAACCTTACGAGAGTACAGGTTTATATATTTGTAGAATATCTACTACAATATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4d2c97d66c941ec7a65b80a935ba6a668637bad2fde33e50d03515ea901446a2
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6941
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Thermotogae viruses Nesbo,C.L., Haverkamp,T.H.A. and Geslin,C. — — GenBank