Protein

View in Explore
Genbank accession
QIG76700.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MASPEWNQTGATASSFGRKGRTLAASGSDIDPIAKAIVMLATGDITVIPAGNLDAGTIAFTGLPAGYIIPFVVRRVTACSSSFASIDA
Physico‐chemical
properties
protein length:88 AA
molecular weight: 8888,03820 Da
isoelectric point:5,98517
aromaticity:0,06818
hydropathy:0,42386

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_I1_23
[NCBI] 		2509727 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG76700.1 [NCBI]
Genbank nucleotide accession
MN988556.1 [NCBI]
CDS location
range 41217 -> 41483
strand +
CDS
ATGGCTTCTCCTGAATGGAACCAGACCGGCGCGACAGCATCGAGTTTCGGCCGCAAGGGCAGGACGCTTGCTGCAAGCGGCTCTGATATCGATCCGATCGCCAAGGCTATCGTCATGCTCGCTACTGGCGACATCACGGTCATTCCTGCCGGGAATCTGGACGCTGGCACAATCGCTTTCACTGGCCTCCCGGCTGGATACATCATTCCATTCGTCGTTCGCCGTGTGACGGCATGCTCCAGTTCTTTTGCGAGCATTGATGCCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
93c5748335c72fe97b4d0f9403abe15495723e73d54a0d10d432cba55a9618df
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8762
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Patterns of diversity and host range of bacteriophage communities associated with bean-nodulatin bacteria Vann Cauwenberghe,J., Santamaria,R.I., Bustos,P., Juarez,S. and Gonzalez,V. 1998-01 — GenBank