Protein

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Genbank accession
QDK00361.1 [GenBank]
Protein name
putative central straight fiber
RBP type
TSP
Evidence RBPdetect
Probability 0,81
Protein sequence
MVLNSIMTGYTMAYIQHSIYTDYDVIGRSFWLKLGEEVDRRDFTGIDTFFVMINNLTPSTTYQIQGAFYDSIIDSELLNAKIGINLSNETNFKTKEKPIIVAARSESEPVDVGVGAPIVVVETTGEASYCTIELKSTATEDSPWTKYYIGALGSTIKFGGVPIGDYKIRISGQVTMPDGVTVDSSGYYEFPSILTVAYNFVPPTAPIDIVFKAARIADGKERYDVRIEWDWERGAGANVREFLVTYINSEEYAKTGWAKAQKINVGAARAATIISFPWKVEHTFKVASIAWGPNKQDITESAPVTFILNEDTPLDNSFVNETGIDVNYAFIKGSMKDGEIWRQTFLIDAATGAINIGLLDEEGKAPISFDPINRVVNVDGKVITRDINAANFIMTNLSGKDNPAIYTQGKSWGDNNSGIWMGMDNTSAKAKLDIGNATQWIRYDGTTLRISSGVVIGTPNGDVDIGTGLQGKQTVFVYKLATSLPAKPLEQDYPPPGWSKTPPNRIDMTQNIYATTGTLDPVTNKLLEGTSWSDVVQWSGTEGTIGHDGQRGPGMYSMGIPGLGGWDDGQANAFFQNNFGKPPVKYDVLTQFNSNAPQTAFTRQWNGVGWINPAMVLHGNMIVNGTVTADKIVAGNAFLSQIGVNIIYDRNAALSGNPEAYYKMKIDLNSGYIHIR
Physico‐chemical
properties
protein length:676 AA
molecular weight: 73981,45830 Da
isoelectric point:4,92836
aromaticity:0,10503
hydropathy:-0,20577

Domains

Domains [InterPro]
IPR057550
STR
1–88
IPR057550 IPR057551 IPR057552 IPR057549
IPR057551
STR
94–188
IPR057551
QDK00361.1
1 676
Architecture
STR
STR
STR
STR
STR 1-88 | STR 94-188 | STR 202-326 | STR 341-655 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QDK00361.1
1 676
Domain Start End Length (AA) Confidence
N-terminal 1 398 398 0,8746
Central domain 399 629 232 0,2500
C-terminal 630 676 46 0,7295
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-398
Central
399-629
C-terminal
630-676

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoS-26175III
[NCBI] 		2576480 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QDK00361.1 [NCBI]
Genbank nucleotide accession
MK907269 [NCBI]
CDS location
range 82524 -> 84554
strand -
CDS
ATGGTCTTAAATAGTATTATGACTGGGTATACTATGGCGTATATCCAGCATTCTATCTATACCGACTACGATGTTATCGGTAGATCATTCTGGCTTAAACTTGGCGAAGAAGTGGATAGAAGAGATTTCACTGGAATCGACACTTTCTTTGTTATGATCAATAACTTAACTCCCTCAACAACCTATCAGATTCAGGGAGCTTTTTATGACTCAATTATTGACTCAGAACTTTTAAATGCAAAAATTGGTATTAACCTCTCTAATGAAACTAACTTTAAAACAAAAGAGAAGCCAATAATTGTTGCAGCAAGATCTGAGTCAGAACCAGTGGATGTTGGGGTGGGCGCTCCAATAGTTGTTGTGGAAACTACTGGTGAAGCAAGTTACTGTACTATTGAGTTAAAAAGTACAGCCACGGAAGATAGTCCTTGGACTAAGTATTACATTGGGGCTTTAGGTTCTACTATTAAATTTGGTGGAGTTCCTATCGGAGATTATAAGATCAGAATATCTGGTCAAGTAACTATGCCTGATGGTGTTACAGTTGATTCTTCTGGTTACTATGAGTTCCCTAGTATTCTAACTGTAGCTTATAATTTTGTTCCTCCTACTGCACCTATCGATATTGTTTTTAAAGCTGCACGAATTGCTGATGGTAAAGAACGATATGATGTTAGAATTGAGTGGGATTGGGAACGCGGTGCTGGTGCTAATGTTCGTGAGTTCTTGGTTACTTATATAAACTCCGAAGAATACGCTAAGACTGGCTGGGCTAAAGCTCAAAAGATAAACGTGGGGGCTGCTAGAGCTGCAACGATTATATCATTCCCATGGAAAGTTGAACATACTTTTAAGGTAGCATCAATTGCCTGGGGGCCAAATAAACAGGATATAACAGAGTCAGCTCCTGTAACATTTATTCTGAATGAGGATACTCCTCTAGATAACAGTTTTGTCAATGAGACGGGTATTGATGTTAACTATGCCTTTATTAAGGGTAGTATGAAAGATGGGGAAATCTGGAGACAGACATTCCTAATTGATGCAGCTACTGGTGCTATTAACATTGGTCTGCTAGATGAAGAAGGAAAAGCACCTATTTCTTTCGATCCTATAAATCGTGTTGTTAACGTTGATGGTAAAGTAATTACTAGAGATATTAATGCTGCGAACTTTATTATGACTAACTTGTCTGGTAAAGATAATCCAGCAATTTACACTCAAGGTAAATCTTGGGGAGATAATAACTCTGGTATTTGGATGGGTATGGATAATACCTCCGCCAAAGCTAAATTAGATATTGGTAACGCCACACAATGGATACGTTATGACGGTACTACTCTGCGTATCTCTAGTGGTGTAGTAATTGGAACACCAAATGGTGACGTAGATATTGGAACTGGTTTACAAGGTAAGCAAACAGTATTTGTTTATAAGTTAGCAACATCTCTGCCAGCTAAACCATTAGAACAAGATTATCCACCCCCAGGCTGGTCTAAAACTCCACCTAATCGTATAGATATGACACAAAATATCTATGCGACTACAGGTACACTTGATCCAGTTACTAACAAACTTCTTGAAGGTACTAGCTGGTCTGATGTAGTTCAGTGGAGTGGTACTGAAGGTACTATAGGACACGATGGACAGCGTGGTCCTGGGATGTACTCCATGGGTATTCCTGGACTAGGTGGTTGGGATGACGGACAAGCTAATGCATTCTTCCAAAATAACTTTGGAAAACCTCCGGTTAAGTATGATGTTCTAACACAATTTAACAGTAATGCTCCGCAAACAGCATTTACCCGTCAATGGAACGGAGTTGGATGGATTAACCCTGCAATGGTTCTTCATGGCAATATGATTGTTAATGGAACTGTTACTGCGGATAAGATTGTGGCAGGAAATGCCTTCTTATCACAAATCGGTGTTAATATAATCTATGATAGAAATGCTGCGTTATCAGGGAACCCTGAAGCATACTATAAGATGAAGATAGACCTAAATAGTGGGTATATCCATATAAGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b22c7d2c25a083105edcdf4fe095625ed7c230cb5c15210e9dc3a0ba92ab7be1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7700
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Natural Occurrence of Escherichia coli-Infecting Bacteriophages in Clinical Samples Pacifico,C., Hilbert,M., Sofka,D., Dinhopl,N., Pap,I.-J., Aspoeck,C., Carrico,J.A. and Hilbert,F. 2019 — GenBank