Protein

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Genbank accession
NP_536838.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,84
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MASLITPQFERYVAEQTIARGTVQFDEFIFANIPGLNENNLAQYLTMPTSAQIVHRQAVSQSGVINENAVVYSVTIGTEVGDFDFNFIGLINRSKNLLAVAVQTDTVKKIRNKNAVQGNSITRNMLLEFSGAKALTGINVNANTWQIDFTVRLHGLDEKIRLTNRDLYGRAVFFDDSFLVKRKTGNQFTIQPGTAYVEGVRMDLSALYNLTANNLPCSVYADLVHHCTVTGEYQTEIKYLTQSKADYVDTANRQHYVQILADIDSQGNVTDRRLLSPFLGMNPLTLDDTTENTQDKWGHTHKLPIASITKKGIVQLSSATNSNSETEAATSKAVKTAYDKAVEAKTTADGKVGLSGNEEIAGDKLFRSQTKFQNGVLISANKGHWDNGYKVYIGADSDNAHLVFGDDTLRLHGSNHRISYNNYHLFHEGYKPRFNEHIINKPNTLAGYGIGNFKVEQGQGDANGYKTDGNYYLASGQNLPENGAWHIEVVSGGATNAVRQIARKANDNKIKTRFFNGSNWSEWKETGGDGVPIGAVVSFPRAVTNPVGFLKADGTTFNQQTFPDLYRTLGDSNQLPDLTRSDTGMTAYFAVDNIPAGWIAFDSIRTTVTQQNYPELYRHLVGKYGSLSNVPLAEDRFIRNASNNLSVGETQSDEIKKHVHKVRTHWVNSSDSNIFYDKTKTVIDSRLRTATTTDDNLSDNGFMHPLLDSPMATGGNETRPKSLILKLCIKAINSLDDVQFWVKAFGVVENAGVLDAGTLAQNMQSVEQKIEENKQSTLREITNAKADINQQFLQAQKNLSQIGTLKKVWEGSVSTGSITISESCYGKTLIFYIQTADDQSNYGDSIEIVSFEAGAEDEGGGRLTSIREIVSKYNYRQVVPKEFTVYIAGDGKTITIGQLDARSIKRIYIR
Physico‐chemical
properties
protein length:910 AA
molecular weight: 100702,26840 Da
isoelectric point:6,39975
aromaticity:0,08901
hydropathy:-0,42560

Domains

Domains [InterPro]
IPR022225
ATT
3–156
IPR022225 IPR051934 cd19958 SSF88874 SSF88874 DC_0818
DC_2293
STR
85–391
DC_2293 cd19958 IPR037053 Coil
IPR005068
STR
307–348
IPR005068 IPR011083
NP_536838.1
1 910
Architecture
ATT
STR
STR
ATT
STR
RBD
ATT 3-156 | STR 157-391 | STR 458-525 | ATT 529-581 | STR 583-731 | RBD 732-910
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
NP_536838.1
1 910
Domain Start End Length (AA) Confidence
N-terminal 1 433 433 0,8101
Central domain 434 632 200 0,0929
C-terminal 633 910 277 0,6339
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-433
Central
434-632
C-terminal
633-910

Taxonomy

  Name Taxonomy ID Lineage
Phage Haemophilus phage HP2
[NCBI] 		2932882 Uroviricota > Caudoviricetes > Peduoviridae > Hpunavirus HP2 >
Host Haemophilus influenzae
[NCBI] 		727 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pasteurellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
NP_536838.1 [NCBI]
Genbank nucleotide accession
NC_003315.1 [NCBI]
CDS location
range 25007 -> 27739
strand +
CDS
ATGGCTAGTTTAATTACGCCACAATTTGAACGCTACGTTGCAGAACAAACTATTGCACGTGGCACAGTACAGTTTGATGAATTTATTTTTGCCAACATCCCAGGTTTAAATGAGAACAATCTTGCGCAATATCTCACTATGCCGACATCGGCACAAATTGTACATCGCCAAGCCGTATCGCAAAGTGGCGTGATTAATGAAAATGCCGTTGTGTATTCTGTGACGATTGGTACTGAAGTCGGCGATTTTGATTTCAATTTTATTGGTTTGATTAATCGTTCTAAAAATCTTTTAGCTGTTGCGGTGCAAACCGATACAGTGAAAAAAATCCGAAATAAAAATGCTGTGCAAGGCAACAGTATTACGCGCAATATGCTTTTAGAATTTAGTGGCGCAAAAGCTCTAACGGGCATTAATGTCAATGCGAACACTTGGCAAATTGATTTTACTGTGCGACTACATGGACTTGATGAAAAAATTCGTTTAACCAATCGTGATCTGTATGGCAGAGCAGTATTTTTCGATGATAGTTTTCTGGTTAAACGTAAAACAGGCAATCAATTTACGATTCAACCAGGCACGGCTTATGTTGAAGGCGTTCGTATGGATTTATCCGCACTTTATAACCTCACAGCAAACAATTTGCCATGTTCAGTTTATGCCGATCTAGTACATCATTGCACCGTAACGGGAGAATACCAAACCGAAATTAAGTATCTCACCCAATCAAAAGCAGATTATGTAGATACTGCAAACCGCCAACATTATGTACAAATTCTGGCGGATATTGATAGCCAAGGCAATGTGACAGATCGCCGCTTGCTTTCGCCGTTTTTAGGCATGAATCCGCTCACATTAGATGACACAACCGAAAACACCCAAGATAAATGGGGTCATACGCACAAGTTACCAATTGCCAGCATCACAAAAAAAGGCATTGTGCAACTAAGCTCAGCTACTAACAGCAACAGCGAAACCGAAGCTGCAACATCAAAAGCCGTGAAAACCGCCTATGACAAAGCAGTAGAAGCCAAAACTACGGCGGACGGTAAAGTGGGGTTAAGTGGCAATGAAGAAATAGCGGGGGATAAATTATTCCGTAGCCAGACTAAATTCCAAAATGGCGTGTTGATTTCTGCAAATAAAGGACACTGGGATAATGGGTATAAAGTCTATATTGGTGCAGATTCTGATAATGCACATCTGGTATTTGGCGATGATACATTGAGATTACACGGCTCAAATCATCGTATTTCGTATAATAATTATCATCTTTTCCATGAGGGCTACAAACCTCGTTTTAACGAACATATTATAAACAAACCTAATACACTTGCAGGCTATGGTATTGGGAATTTTAAAGTAGAACAAGGGCAGGGCGATGCCAATGGCTATAAAACCGATGGCAATTATTACTTAGCAAGCGGTCAAAATCTACCCGAAAATGGGGCATGGCATATTGAAGTAGTTAGCGGTGGGGCAACAAATGCGGTGCGTCAAATTGCACGTAAAGCAAATGATAACAAAATCAAAACACGCTTTTTTAATGGCTCAAATTGGTCAGAATGGAAAGAGACAGGCGGCGACGGCGTGCCTATTGGTGCGGTGGTGTCATTTCCTCGTGCGGTAACTAATCCCGTTGGTTTTTTAAAAGCCGATGGCACGACATTTAACCAACAAACCTTTCCCGATTTATACCGCACTTTGGGCGACAGCAACCAACTTCCTGATTTAACTCGTAGCGACACAGGCATGACGGCTTATTTTGCCGTGGATAACATTCCTGCAGGCTGGATTGCCTTTGATTCAATCAGAACAACCGTTACACAGCAAAATTACCCCGAGTTATATCGTCACTTAGTCGGTAAATATGGTTCTCTTTCAAATGTGCCATTAGCTGAAGACCGATTTATTAGAAATGCATCAAACAATTTATCGGTTGGTGAAACGCAAAGTGACGAGATTAAAAAGCACGTTCACAAAGTGAGAACACACTGGGTTAATTCAAGTGATAGTAATATTTTTTATGACAAAACGAAAACAGTTATAGATTCACGATTACGCACTGCAACTACAACTGATGATAATCTCAGTGATAATGGATTTATGCATCCGCTATTAGATAGCCCAATGGCAACAGGTGGAAATGAAACTCGCCCTAAATCATTAATCCTCAAATTATGCATCAAAGCCATTAACAGCCTTGATGACGTGCAATTCTGGGTGAAGGCTTTCGGTGTTGTTGAAAATGCAGGGGTGCTTGATGCGGGTACACTTGCGCAAAATATGCAAAGTGTTGAACAAAAAATAGAAGAGAATAAACAATCAACTTTGCGAGAAATCACCAATGCAAAAGCTGATATAAATCAGCAATTTTTGCAGGCACAAAAGAATTTATCTCAAATTGGCACATTAAAAAAAGTCTGGGAAGGTAGCGTGAGTACTGGGTCAATTACTATATCAGAGAGTTGCTATGGCAAAACGTTAATTTTTTATATTCAGACAGCAGATGATCAAAGTAATTACGGTGATTCCATTGAAATAGTCAGTTTTGAAGCGGGTGCAGAAGATGAAGGCGGAGGTCGTTTGACTAGTATTCGTGAAATAGTATCCAAATATAATTATCGCCAAGTAGTACCCAAAGAGTTCACTGTGTATATTGCTGGTGACGGTAAAACTATAACCATTGGCCAACTTGATGCACGTTCTATAAAACGTATTTATATTCGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4d60e418d2bbf8a23bb047d3e7a85019fe62790b4b4cfef65b75319b68818032
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7286
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacteriophage HP2 of Haemophilus influenzae Williams,B.J., Golomb,M., Phillips,T., Brownlee,J., Olson,M.V. and Smith,A.L. 2002 12446640 GenBank