Protein

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Genbank accession
XOD42760.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MPNIMKPTGINAIWSENGQKVDPGAVKVGLGWVTELPPYQTANFIEYKQDLFNAHVNQHGIPEWDSVTEYQGNLSYTQGSNGVIYKCLRTHSDKIPTDPLNITAGYWRAAFEDAGEATKVQANLDRHVTNYNTLSGIGNVVIARQNLSVYSRAEGDARYAMLHGNGSNVFSVAPATQPTHAIPLSQLSTLVPPATETVAGVMAVATTIETEAGANDTKAVSPLKAAQVYLKRKDNLSNLSNVTAARANLGLSDTATMPSSTFLKAASNLADVPNKALARSNLGITSSATQPETYFLRSAQNLADVPNKAQARVNLGLTAMATTAPSAVVMKADNLAGLTNTAAARSNLGLGTASTRNVGDFLSSGANLADLTNIQAARNNLGLKGGATLDVWGLPANTTAMDFQSSQSDISRGWARLPNGLLLQWGTGPGLSDDTRTNIQLPVPARILNVQVTVMGTFNNSIGPGAFMTDMWSNTGFRVSCNWGNWSYPFNWFAITSTL
Physico‐chemical
properties
protein length:499 AA
molecular weight: 53036,90330 Da
isoelectric point:7,74780
aromaticity:0,07214
hydropathy:-0,17836

Domains

Domains [InterPro]
DC_0043
STR
1–316
DC_0043 DC_0362
G3DSA:2.60.40.3940
RBD
406–495
G3DSA:2.60.40.3940
IPR054075
RBD
416–495
IPR054075
XOD42760.1
1 499
Architecture
STR
RBD
STR 1-316 | RBD 321-499
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage HHBS18_1
[NCBI] 		3390390 Viruses >
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XOD42760.1 [NCBI]
Genbank nucleotide accession
PQ287651.1 [NCBI]
CDS location
range 21595 -> 23094
strand +
CDS
ATGCCAAACATTATGAAGCCTACGGGTATTAACGCTATCTGGTCTGAAAACGGCCAGAAGGTTGACCCGGGTGCTGTAAAAGTTGGGCTTGGATGGGTGACAGAACTACCTCCCTACCAAACTGCCAACTTCATTGAATACAAGCAAGACTTGTTCAACGCACACGTTAACCAGCACGGTATCCCCGAATGGGATAGCGTCACAGAGTATCAGGGAAACCTGAGTTATACTCAAGGTTCTAACGGTGTGATCTACAAGTGCCTTAGAACCCATTCCGACAAGATTCCAACCGACCCTCTCAACATCACAGCAGGATACTGGCGGGCGGCGTTCGAGGATGCAGGGGAGGCGACCAAGGTTCAAGCTAACCTTGATCGGCACGTGACAAACTACAACACCCTCTCTGGAATCGGAAACGTAGTTATTGCAAGACAGAACCTGAGCGTGTATAGTAGAGCGGAAGGCGACGCCCGTTATGCTATGCTGCACGGTAATGGATCGAACGTCTTTAGCGTAGCACCAGCTACTCAGCCTACACATGCCATCCCACTAAGCCAGCTATCTACTCTTGTCCCTCCTGCGACTGAGACTGTAGCCGGGGTTATGGCAGTTGCTACGACTATTGAGACAGAAGCCGGAGCCAACGATACCAAGGCTGTCAGTCCTCTGAAGGCTGCTCAAGTGTATCTGAAGCGGAAGGATAACCTGTCCAACCTGAGCAACGTCACAGCAGCTAGAGCTAACCTAGGGCTCTCTGATACGGCCACGATGCCATCTAGCACGTTCTTGAAGGCAGCCAGCAACCTAGCTGACGTCCCTAACAAGGCGCTAGCCAGATCGAACCTAGGCATCACCAGTAGCGCTACTCAGCCTGAGACCTACTTCCTTAGAAGTGCTCAGAATCTAGCAGATGTTCCTAACAAGGCTCAAGCTAGAGTGAATCTGGGGCTAACTGCTATGGCAACTACGGCTCCTTCCGCTGTTGTCATGAAAGCTGACAACCTAGCCGGGCTGACAAATACAGCCGCTGCCCGCTCTAACCTTGGACTAGGCACAGCCTCTACTCGAAACGTCGGAGACTTCCTCTCGTCTGGTGCTAACCTAGCAGACTTGACAAACATTCAAGCAGCTAGAAACAACCTAGGCCTTAAAGGCGGTGCCACTCTAGACGTGTGGGGCCTCCCTGCCAATACAACCGCCATGGACTTCCAGTCGAGCCAATCGGACATTTCCAGAGGCTGGGCTAGACTTCCTAACGGCCTACTGCTACAGTGGGGAACTGGACCGGGCCTGTCTGACGACACAAGGACGAATATTCAGCTTCCTGTTCCAGCAAGAATCTTGAACGTGCAGGTAACCGTAATGGGAACGTTCAACAACTCTATCGGCCCGGGCGCTTTCATGACTGACATGTGGAGCAACACAGGGTTCCGAGTTAGCTGTAACTGGGGTAACTGGTCTTATCCGTTCAACTGGTTCGCCATCACTTCCACCCTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8dc13010b7be4bc49e8c3b10c8af284a2dfdfd4a48d6d754a3230362158a780b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7626
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50