Protein

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Genbank accession
AUV64039.1 [GenBank]
Protein name
tail fiber/host adhesion protein
RBP type
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MAISSGWVGSSAVSETGQRWMSAAMQAVRLGRPAYMSAMVGRSKEIHYSIGASNSYNKDTLINWMKAQGSTPVVITITGNIVSQSTGVPCLDFPSSLTNEYVTLIINSGVHVWGRGGNGGNNSAGGAGGNAINNGIGTRLRITNNGAICGGGGGGGGGYWSPFPQMKLTFGGGGGRPFGAAGGSANMEQGATAGTISAPGKGSVNGIYNGGNGGDAGGAGGKCNIRGQGSEYNGGAAGKAVTGNAPRWDKVGTIYGARV
Physico‐chemical
properties
protein length:259 AA
molecular weight: 25672,25450 Da
isoelectric point:9,81578
aromaticity:0,06950
hydropathy:-0,20425

Domains

Domains [InterPro]
IPR048291
ATT
1–40
IPR048291 IPR007932
DC_1679
STR
4–196
DC_1679
AUV64039.1
1 259
Architecture
ATT
STR
RBD
ATT 1-40 | STR 41-196 | RBD 197-259
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage Sf20
[NCBI] 		2024307 Uroviricota > Caudoviricetes > Pantevenvirales > Krischvirus > Krischvirus RB49
Host Shigella flexneri
[NCBI] 		623 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUV64039.1 [NCBI]
Genbank nucleotide accession
MF327006 [NCBI]
CDS location
range 146125 -> 146904
strand -
CDS
ATGGCAATATCTTCTGGATGGGTAGGATCATCTGCTGTGTCCGAGACTGGTCAACGGTGGATGAGCGCCGCAATGCAAGCTGTACGCTTAGGTCGTCCGGCGTATATGTCGGCAATGGTCGGACGCTCTAAAGAGATTCATTATAGCATTGGTGCTAGTAACTCTTACAATAAAGACACTCTTATTAACTGGATGAAAGCACAAGGATCTACTCCTGTAGTAATTACTATCACAGGTAATATTGTTTCCCAATCTACTGGCGTTCCTTGTCTTGACTTCCCTAGCTCGTTAACAAACGAGTATGTAACACTGATCATCAACTCCGGTGTTCATGTTTGGGGGCGTGGTGGTAATGGTGGCAATAACTCCGCTGGTGGTGCTGGTGGTAATGCAATTAACAACGGTATAGGCACACGCTTACGCATCACAAATAACGGCGCTATTTGCGGTGGCGGTGGCGGTGGCGGCGGAGGATACTGGTCTCCTTTTCCACAAATGAAATTGACTTTTGGAGGTGGCGGCGGTCGTCCATTTGGCGCTGCCGGTGGGTCTGCTAATATGGAACAGGGTGCTACTGCTGGTACTATTTCCGCGCCAGGTAAAGGGTCTGTCAACGGTATATATAATGGCGGTAACGGTGGTGATGCTGGTGGCGCTGGTGGTAAATGTAATATCCGTGGACAGGGATCGGAATATAATGGCGGAGCGGCTGGTAAGGCTGTTACTGGCAATGCCCCTCGCTGGGATAAAGTAGGCACGATCTACGGTGCTCGCGTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0596ee422d61e641fab19e0bef3a5647e2c21576854d1b425cdcc952692a6d66
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8945
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The isolation and characterization of 16 novel Shigella-infecting phages from the environment Doore,S.M., Schrad,J.R., Dover,J.A. and Parent,K.N. 2020-09-29 — GenBank