Protein

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Genbank accession
AUR98269.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSDLDNAINSINASAAKAENTATFLDDMSTFDDQSSVTNPNNGQTVASIPKQVKDRTDELFTAAESDINQAVSDAAQSATDAQDAADSIGRYQGLWPDTGGSADKGDTYQTQVSGTPTGQYFTALQNTTVDPVGDDVNWRVVVSDKSLGGFTNYQWKNITSIVNFDHSVGDVIQTSGYNNEFDRGGSVYIITDDTDGVDGYGEFRLINGLTARFLNPRRAFSPDEFGVQRSNDNPLDQARYDAWLEFVHGTEGAWFTGFTGGSYIIYRGLIFRKSFIGDPNTVRFLLPWQYAREVLSETETTPDGRFDFNVSAVIGINPFTSTDTDDRFEFKNITATCTNNSSQDAADYGIWFPYGTSFEIDNIVIVDPKEWGFYVTGELWGGVVKRLNVFNAAKNGCQFSVGTHMTIETLYMHGSSGTGGVPYRFNNMVYSSIKNLAADGYDGAQYLYGILSCWGCNFSGLGSEHCSYDDAFYIGDSNITIDGVFLDNSEASNSVVNIFSASTVNFRAFRSRDLTRTGSARFARILTSGTTFNSDVPARWTWDGESSPENTVLASVNKVATTYSTITYSDTTPTSEEMGIGDKVWSLDEKKLYMKDNALGVIPIAEPLQQAYSSASRPVSGNYFGRMIFDSTLQKPLWYISSGVWKDADGVTV
Physico‐chemical
properties
protein length:654 AA
molecular weight: 71737,70070 Da
isoelectric point:4,39049
aromaticity:0,12385
hydropathy:-0,35841

Domains

Domains [InterPro]
Coil
Unmapped
1–21
Coil
DC_0090
STR
1–653
DC_0090
AUR98269.1
1 654
Architecture
STR
STR 1-653 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR98269.1
1 654
Domain Start End Length (AA) Confidence
N-terminal 1 236 236 0,9935
Central domain 237 550 315 0,9836
C-terminal 551 654 103 0,9563
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-236
Central
237-550
C-terminal
551-654

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.248.O._10N.261.54.F1
[NCBI] 		1881267 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio cyclitrophicus
[NCBI] 		47951 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR98269.1 [NCBI]
Genbank nucleotide accession
MG592614.1 [NCBI]
CDS location
range 31607 -> 33571
strand +
CDS
ATGAGCGATTTAGATAACGCTATAAATTCAATTAACGCATCAGCAGCTAAGGCAGAAAATACCGCTACCTTTCTGGATGATATGTCGACGTTTGACGATCAATCAAGCGTAACCAACCCAAACAACGGACAGACTGTTGCGTCTATACCTAAACAGGTAAAAGATCGCACAGATGAGTTGTTTACCGCTGCTGAGTCGGATATCAATCAAGCTGTATCTGACGCTGCACAAAGCGCAACAGATGCACAAGATGCTGCGGATAGTATTGGACGATATCAAGGATTATGGCCCGATACAGGCGGAAGCGCTGATAAAGGCGATACATATCAAACGCAAGTTAGCGGCACACCTACAGGTCAATATTTTACAGCACTACAAAATACAACTGTCGATCCGGTTGGTGATGATGTTAACTGGCGAGTCGTGGTTAGTGACAAATCTCTTGGCGGATTTACTAATTATCAATGGAAAAATATCACCAGTATCGTTAATTTTGACCACTCTGTTGGCGATGTTATACAAACGAGCGGTTATAACAACGAGTTTGATAGGGGTGGTAGTGTGTATATAATTACCGATGATACAGATGGCGTTGATGGTTACGGAGAGTTTAGGCTGATAAACGGGCTAACCGCTAGATTTCTTAACCCAAGAAGAGCTTTTAGCCCTGATGAGTTCGGCGTTCAGCGCAGCAATGACAACCCGCTAGACCAAGCAAGATATGACGCTTGGTTAGAATTTGTCCATGGCACAGAAGGGGCCTGGTTTACGGGATTTACCGGTGGCAGTTATATTATTTACCGTGGGTTAATCTTTCGAAAGTCATTTATAGGAGACCCGAACACCGTTCGCTTTCTTCTTCCATGGCAGTACGCTAGAGAGGTTCTTTCAGAAACAGAGACAACGCCGGATGGAAGGTTTGACTTCAACGTTTCCGCTGTAATTGGGATTAACCCGTTCACCTCTACAGATACTGATGATAGATTTGAGTTCAAAAATATCACGGCGACATGTACGAACAACTCAAGCCAGGATGCGGCAGACTACGGAATATGGTTTCCATACGGAACTTCATTTGAAATAGATAACATCGTGATTGTCGATCCTAAAGAGTGGGGGTTTTATGTTACAGGGGAGTTATGGGGCGGCGTAGTTAAGCGATTGAATGTGTTTAATGCTGCTAAAAATGGGTGTCAATTTAGTGTTGGTACGCACATGACGATAGAGACACTGTACATGCATGGCTCTAGCGGGACTGGTGGCGTTCCATATCGATTCAATAATATGGTTTATAGTTCAATCAAGAATCTGGCGGCGGACGGATATGATGGCGCCCAGTATCTTTATGGGATACTGTCATGTTGGGGTTGTAATTTTAGTGGGTTAGGTTCGGAGCATTGTTCCTACGATGACGCTTTCTACATTGGAGATTCAAATATTACCATTGATGGGGTTTTCTTGGATAACAGTGAGGCGAGCAACTCTGTTGTGAATATATTCTCAGCATCTACCGTTAACTTTAGGGCGTTTAGAAGCAGGGATTTAACAAGGACAGGTAGTGCCCGATTTGCAAGAATACTCACAAGCGGGACAACGTTTAATTCCGACGTTCCTGCGCGATGGACGTGGGATGGGGAGTCATCTCCAGAAAACACTGTGCTAGCTTCTGTAAATAAAGTAGCAACAACTTACAGCACTATTACATATTCTGACACCACTCCGACCTCAGAGGAAATGGGGATTGGTGATAAGGTCTGGTCATTGGACGAGAAAAAACTTTATATGAAGGATAACGCACTCGGTGTAATACCTATTGCTGAGCCGCTACAACAGGCATATAGTAGCGCAAGTCGACCTGTATCGGGGAATTACTTCGGCAGGATGATATTTGACTCAACATTGCAAAAGCCGCTGTGGTATATATCCAGCGGGGTGTGGAAGGATGCTGACGGTGTTACCGTGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
1f9256b6d6e13cc52245f4cb1be75c0de99f60fed0e23701b8753302d57fa4ea
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7972
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank