Protein

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Genbank accession
YP_006560258.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MALPIFQRTVTNSAGDVIEGAQVSVFDESTGLLSTIYSNREGTAALSNPFLTGSDGLASFYAQQGEYRISVSSVAGSVTWRYQPLIGTLDEGAAVLQAGIYAQESAGYANTAIDARDVAIGAANYKGDWTVSTNVLQGESYSYSGSTWIAKQNSVGQTPAVGVYWLKGVGTAAFLNVGTTPNDIPTVSTLVSSRSALLKTDRNTVAFEVSGADVLASQDFSYSTDGSIFEILSGEVVTLPTLASASDYKIYGLSDGSLSAQLFDTARPTGGVLIGGFHVYHTTGGINPNSLWDINFRPKCNPRAMTLSPDRRVWADIYLMDVEYGLNGYSRSDVTIADGASPPIVPAIYGGNGVTTYGSLTWFEAWDLVINAGKRLAFWGEFSGLAYGVVEQQSFGTDPVTTKYQAGHRSAIGLEQATGVMWIWGADTQGSSGSAAAITDGRGSVYSGDPRSVLLGAGWNDGVAAGSRSASWNASTGGSDGGISVRAVCDHLIL
Physico‐chemical
properties
protein length:494 AA
molecular weight: 51740,61670 Da
isoelectric point:4,57624
aromaticity:0,10121
hydropathy:-0,00182

Domains

Domains [InterPro]
DC_1436
ATT
1–165
DC_1436 SSF141658 IPR016187
G3DSA:2.80.20.10
STR
196–321
G3DSA:2.80.20.10 IPR042095
YP_006560258.1
1 494
Architecture
ATT
STR
ATT 1-165 | STR 195-486 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_006560258.1
1 494
Domain Start End Length (AA) Confidence
N-terminal 1 244 244 0,8207
Central domain 245 443 200 0,0025
C-terminal 444 494 50 0,9968
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-244
Central
245-443
C-terminal
444-494

Taxonomy

  Name Taxonomy ID Lineage
Phage Marinomonas phage P12026
[NCBI] 		1176423 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Marinomonas
[NCBI] 		28253 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Oceanospirillales
Host Marinomonas sp.
[NCBI] 		1904862 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Oceanospirillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_006560258.1 [NCBI]
Genbank nucleotide accession
NC_018269 [NCBI]
CDS location
range 14218 -> 15702
strand +
CDS
ATGGCATTACCAATATTTCAGCGAACAGTGACAAACAGCGCCGGAGACGTGATTGAAGGCGCTCAGGTTTCCGTATTTGATGAATCAACAGGTCTTCTGTCTACGATTTACAGCAACAGAGAAGGGACGGCAGCTCTATCTAATCCATTCTTGACGGGATCGGACGGTCTAGCTTCATTCTACGCCCAGCAGGGTGAATACAGAATCTCTGTCTCAAGCGTTGCGGGATCGGTGACTTGGCGCTACCAGCCTTTGATCGGCACTTTAGATGAAGGTGCGGCAGTGTTGCAGGCTGGGATCTATGCGCAAGAATCGGCAGGCTACGCAAATACAGCAATTGACGCTCGCGATGTAGCCATTGGTGCAGCTAACTATAAAGGCGACTGGACAGTATCAACTAACGTGCTGCAGGGCGAGTCATACAGCTACTCTGGAAGCACTTGGATAGCTAAACAAAACAGCGTAGGCCAAACGCCTGCCGTTGGTGTGTACTGGCTCAAAGGCGTTGGCACGGCTGCATTTCTAAATGTAGGTACAACCCCAAATGACATTCCTACCGTTTCAACACTGGTTTCTTCGCGATCAGCATTATTAAAAACAGATCGCAACACCGTAGCTTTCGAAGTTTCTGGGGCTGACGTGCTAGCCTCGCAAGATTTTTCATATTCAACTGATGGCAGTATATTTGAAATATTGTCAGGTGAGGTAGTCACCCTACCAACACTTGCGAGCGCCTCTGATTATAAAATTTATGGATTGTCTGATGGCAGCTTATCTGCTCAATTGTTCGACACAGCAAGACCAACTGGCGGTGTTCTCATTGGTGGATTCCACGTCTACCACACCACAGGGGGGATTAACCCGAATAGTCTGTGGGATATAAATTTTAGACCTAAATGTAATCCACGCGCAATGACTCTATCACCGGATCGACGTGTTTGGGCGGACATCTATTTGATGGATGTTGAATATGGTTTAAATGGCTATAGCAGATCAGATGTGACTATAGCAGACGGGGCTAGCCCTCCTATAGTACCCGCCATCTACGGTGGTAATGGAGTGACGACTTACGGATCTTTAACGTGGTTCGAAGCATGGGATCTAGTAATAAACGCTGGTAAGCGCCTTGCGTTCTGGGGGGAGTTTAGCGGCTTAGCTTACGGTGTTGTTGAGCAGCAGAGTTTCGGTACAGATCCAGTGACTACTAAGTACCAAGCAGGTCATCGCAGCGCAATAGGTTTAGAGCAAGCAACGGGGGTAATGTGGATATGGGGAGCGGATACGCAGGGTTCGTCTGGCTCCGCTGCGGCAATCACTGATGGTCGGGGTAGTGTTTACAGTGGTGATCCACGTTCGGTGCTACTTGGTGCCGGCTGGAACGATGGTGTTGCTGCAGGTTCTCGTTCTGCGAGCTGGAACGCCTCAACTGGCGGCTCCGACGGCGGCATCAGTGTCCGTGCCGTCTGTGACCACTTGATCCTGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
a89a981fc5a80265832ccfccec376033dfc9adc7ebe070551fb64c5f2676d2e4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7148
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50