Protein

View in Explore
Genbank accession
XAL80075.1 [GenBank]
Protein name
tail spike protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MELKTFFAQDKFGNLVPGATVTVYLSGTTTLATGLKDQTGAALSNPFNADSTGKAAYQAPNGTYDMVIGTADGTTSRIALQFFDYNTVIDAQNQTAANLAAQQALLTQTQSIINNAGDQSTLVRLNQPDAVTIVGAGPQGYGTPPSTTPHLSDVIKRVTPFQFGAKANGTDDDAPAIQAAHDWCMAQSARDPSDTTRRTGGYILDLNGPRYWTIKSSMTWNMGDIIIEGGMSTLDCRQFPVGTDINNQTVVINATYGGAYHQTRSWWRDINMLGPGQSSFCTAIRSNRTAAAPGGYERLSNVFYNGSIEAFGRGLSVGSNSYFQTYYNFSFGHCNEAYYFEPGGKNYGEQITFYSCVFNAGNYQVTTYGGMSNFYGCSFDYCYHQQMVLNGGLINCVNCWWEGYGPVDYIINIPESTTSVRLNIIGGLFSFKAGATGAESRATSNPFYFGTRAAVKFENVQFQKLGNAYYGDSTTAWIDGASQGVSFSGCYFPNSANSFTTVVMNSDPTVINNQFATDSYTLGIGAENWLGDAWILPNSDNGLVRKNRWGYGLSNGGTTFSFTRTNNGFVNLDVTQPANSGTFEAVIGMIPVKSTGQVVHYASGQLYLGTGDGSVNIKTYWVKLIVKGAPNNPDEPQILEMVKATDVNYPIGGTSGQLHNFRWPPSMPTGTQSPASTVVAPDWATHCILTLDISKIKRNMGGIRINEVFMRQI
Physico‐chemical
properties
protein length:713 AA
molecular weight: 77197,03280 Da
isoelectric point:5,55615
aromaticity:0,11921
hydropathy:-0,24684

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XAL80075.1
1 713
Domain Start End Length (AA) Confidence
N-terminal 1 172 172 0,9917
Central domain 173 526 355 0,9937
C-terminal 527 713 186 0,9862
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-172
Central
173-526
C-terminal
527-713

Taxonomy

  Name Taxonomy ID Lineage
Phage Serratia phage WR01
[NCBI] 		3135697 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Serratia marcescens
[NCBI] 		615 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XAL80075.1 [NCBI]
Genbank nucleotide accession
PP537919 [NCBI]
CDS location
range 21104 -> 23245
strand +
CDS
ATGGAACTGAAAACATTTTTCGCTCAAGATAAATTCGGTAATTTGGTGCCAGGCGCGACCGTTACCGTGTATTTGTCTGGCACAACGACATTGGCCACTGGATTGAAAGATCAAACTGGCGCGGCGTTGTCCAACCCATTCAACGCCGACAGCACTGGTAAAGCAGCTTATCAAGCGCCGAACGGAACCTATGACATGGTCATCGGAACCGCTGATGGCACAACCAGCCGAATCGCCTTGCAGTTTTTCGACTACAACACAGTAATCGATGCGCAAAACCAGACGGCGGCGAACCTGGCTGCTCAGCAAGCGTTGTTGACCCAGACCCAAAGCATCATCAATAACGCTGGTGATCAATCCACCCTAGTTCGATTGAACCAGCCGGATGCGGTGACGATTGTTGGCGCAGGGCCGCAAGGTTATGGCACCCCTCCCTCAACAACGCCTCATTTGAGCGATGTGATCAAGCGTGTGACACCGTTCCAATTCGGCGCTAAAGCAAACGGAACGGATGATGATGCGCCAGCTATTCAAGCCGCTCACGATTGGTGCATGGCGCAGTCAGCGCGTGACCCAAGCGACACGACAAGACGCACTGGCGGCTATATCCTGGACTTGAACGGGCCGCGCTACTGGACAATCAAGTCATCCATGACTTGGAATATGGGCGACATAATCATCGAAGGCGGAATGTCAACGCTTGATTGCCGTCAATTCCCGGTAGGCACCGACATCAACAACCAAACTGTCGTCATCAACGCAACGTATGGCGGCGCATATCACCAAACGCGCTCTTGGTGGCGTGATATTAACATGTTGGGGCCGGGTCAATCTTCCTTCTGTACGGCAATACGTTCCAACCGAACCGCTGCCGCTCCTGGTGGCTACGAGCGCCTCAGCAATGTGTTCTACAACGGCAGCATCGAGGCATTTGGCCGAGGCCTTTCCGTTGGCTCCAACAGCTATTTCCAAACGTACTACAATTTCTCATTCGGCCACTGTAATGAGGCTTATTACTTCGAGCCGGGCGGAAAGAACTATGGTGAGCAGATCACCTTTTACTCCTGCGTGTTCAACGCCGGTAACTATCAGGTGACCACCTATGGCGGCATGTCCAACTTCTATGGTTGCTCTTTCGACTACTGCTATCACCAGCAGATGGTGCTCAACGGCGGCCTGATCAACTGCGTGAACTGTTGGTGGGAGGGATACGGCCCTGTTGATTATATCATCAACATCCCTGAGTCAACTACGTCTGTTAGATTGAATATCATCGGCGGCTTGTTCTCATTCAAGGCTGGTGCCACCGGTGCTGAGTCAAGAGCGACCTCAAACCCGTTCTATTTCGGCACGCGTGCAGCGGTTAAGTTCGAGAACGTTCAATTCCAAAAACTGGGCAACGCCTATTATGGCGACTCCACAACGGCATGGATTGATGGCGCATCCCAAGGCGTTTCATTCAGCGGCTGTTATTTCCCTAATAGTGCAAACTCATTCACGACTGTTGTGATGAACTCAGACCCTACAGTGATCAACAACCAATTTGCAACTGATAGCTACACTCTTGGAATAGGCGCTGAAAACTGGCTCGGTGACGCGTGGATTCTGCCTAACTCAGACAACGGTCTTGTAAGGAAAAACCGTTGGGGGTATGGACTGTCCAATGGCGGCACGACATTTTCGTTCACAAGAACAAACAACGGATTTGTCAATCTTGACGTTACACAGCCAGCAAACTCAGGAACGTTTGAGGCTGTAATAGGAATGATCCCTGTGAAAAGTACGGGCCAGGTTGTTCACTATGCATCTGGCCAATTGTATCTAGGAACTGGTGATGGCTCTGTAAATATCAAAACTTATTGGGTCAAGTTGATCGTCAAGGGTGCTCCAAACAACCCCGATGAGCCTCAGATTCTTGAGATGGTTAAAGCTACTGACGTAAACTATCCAATCGGTGGAACGTCAGGACAATTGCACAACTTCCGTTGGCCACCGTCGATGCCTACTGGCACTCAATCTCCAGCCTCAACTGTTGTGGCTCCTGATTGGGCTACCCACTGCATCCTCACTCTGGACATATCAAAGATCAAGCGAAATATGGGCGGCATCAGAATCAATGAAGTGTTCATGCGCCAGATATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1785441fada7ca13d8c9e5122b4e9bb26ae08edb5314b157e30f4802d80d6912
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7054
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A novel Serratia marcescens bacteriophage from South Africa - a tool to tackle produce associated antibiotic-resistant Serratia marcescens? Dapuliga,C.C., Schmidt,S. and Claussen,M. 2026-01 — GenBank