Protein

View in Explore
Genbank accession
XPO96324.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSTTITNLPETSKVNGSDYLVLDQPDKTVKSTVSNFLTDTGVVLATQLKDTDGADLIQSSNGNTVQEELNNNLLNDREQWRRSLAEAGLTLVDGSFEEGATLNNNTDAVWYIAGAQCYTWGSGFPKDVPPKSTPTSTGGIGPSTWVSVSSKSLRQDIASNSGFALIGHCPGVSALRGIEPVSNGQKILLSGHTEGYNYGGGEFTAVLDGSTYTDDNGNYIKTTGGAVWIREKKTHAYAADYGFITNDASKATSNAAAIVAAAKFAFENGTDVWLPFGKKYIDDVVLNHPVTICANMTVFGSSLVSREQESDILHIGSGYAFDFTPQVRPTTPSSENPVIDGPALIGLSIRGTNNGKAGWRVNNSTVVGNESYARRNVTIKNCQVSGYHSGYGYEMYWTFTNKLHDVIVWDCAVTYYIRSCYATDHFGCIYENSSYGCLAINCYSNNHYGGAVEGIRSMSAHTKPAGYDENGNSPLSYDGIGFRVRGGNTTFYGGYVEANRIHAQIENAGRFAFSGTYINNTNTERMGHGISGELRVTHCNIQGDPSIGTWVQASASLHCSYAEIHSNAYVSGTTKPNTVPNIASVGEFDVYDGTISDSNGARRVRLGQDFQTGGYQTNGGVPRETYSEIFATRVVNAGNGSADRTVDISALATVTGQITALQSAGTLTFTNTNTAIAKEGRDLCFVINASGACSLVFGSGFRMVSSSPISLKNAQTAVIEFRSQGNKYYQKGPVNIMVT
Physico‐chemical
properties
protein length:739 AA
molecular weight: 79139,46920 Da
isoelectric point:5,63811
aromaticity:0,09608
hydropathy:-0,29418

Domains

Domains [InterPro]
DC_1953
STR
3–734
DC_1953
G3DSA:2.10.10.80
ATT
89–160
G3DSA:2.10.10.80 IPR011050
IPR040775
RBD
93–149
IPR040775
XPO96324.1
1 739
Architecture
STR
ATT
STR
STR 3-88 | ATT 89-160 | STR 161-734 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XPO96324.1
1 739
Domain Start End Length (AA) Confidence
N-terminal 1 249 249 0,9875
Central domain 250 606 358 0,9762
C-terminal 607 739 132 0,9663
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-249
Central
250-606
C-terminal
607-739

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage EF1-1
[NCBI] 		3385239 Viruses >
Host Escherichia fergusonii
[NCBI] 		564 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XPO96324.1 [NCBI]
Genbank nucleotide accession
PQ571289.1 [NCBI]
CDS location
range 87420 -> 89639
strand +
CDS
ATGTCAACTACAATTACTAATTTACCAGAAACATCAAAAGTTAATGGTTCAGATTACCTGGTTTTAGATCAACCTGATAAAACTGTTAAAAGCACAGTTTCCAACTTTCTTACTGACACTGGGGTGGTTTTAGCCACCCAGTTGAAAGATACAGATGGAGCAGATTTAATACAATCCTCAAATGGTAATACTGTTCAGGAAGAGTTGAATAACAATCTTCTTAATGATCGTGAACAGTGGCGTCGTAGTCTTGCTGAGGCAGGGTTAACACTTGTTGATGGTAGCTTTGAGGAGGGTGCTACATTAAATAATAATACTGATGCTGTCTGGTACATAGCGGGTGCTCAGTGCTACACATGGGGGTCTGGTTTCCCTAAAGATGTACCACCTAAATCAACCCCTACATCAACTGGTGGTATTGGCCCTAGTACGTGGGTTAGTGTTTCAAGCAAATCACTACGTCAAGATATCGCGTCAAATTCTGGTTTTGCTTTGATTGGCCATTGCCCTGGTGTTTCCGCGCTGCGAGGTATTGAGCCTGTTTCTAACGGGCAGAAAATTTTGCTGTCTGGTCACACAGAGGGTTACAACTACGGCGGCGGCGAGTTCACAGCAGTGTTGGATGGCAGCACGTACACTGACGATAACGGGAACTACATCAAAACAACTGGCGGCGCTGTCTGGATTCGTGAAAAGAAAACTCACGCGTATGCCGCTGACTATGGTTTCATAACCAACGATGCCAGTAAGGCCACCAGTAATGCTGCCGCTATTGTTGCTGCGGCAAAGTTTGCCTTTGAAAACGGAACCGATGTTTGGCTGCCTTTTGGCAAGAAATATATTGACGATGTTGTTTTAAATCACCCTGTGACAATCTGCGCCAACATGACGGTGTTTGGTTCTTCATTGGTAAGCCGTGAACAGGAATCTGATATCTTACATATTGGTAGTGGTTATGCGTTTGATTTCACGCCACAGGTAAGACCAACAACACCGTCAAGCGAAAATCCTGTTATTGATGGCCCTGCACTAATCGGCCTTTCAATTCGCGGCACAAATAACGGGAAGGCAGGATGGCGCGTAAACAATTCCACCGTGGTTGGAAATGAAAGCTACGCAAGACGTAACGTGACAATCAAAAACTGTCAGGTTTCCGGTTATCATTCCGGTTACGGTTACGAAATGTACTGGACGTTCACGAATAAACTCCATGACGTAATTGTGTGGGATTGCGCAGTCACTTATTATATTCGTTCATGCTATGCAACGGATCACTTTGGTTGCATTTATGAAAATAGTTCTTACGGCTGCCTTGCCATAAACTGCTATTCAAACAATCATTATGGTGGTGCTGTTGAAGGCATCAGATCGATGTCAGCTCACACAAAACCGGCAGGTTATGACGAAAACGGTAATTCACCGCTGTCTTATGACGGAATTGGATTCCGTGTTCGCGGTGGTAACACCACATTCTATGGTGGATATGTAGAAGCAAACCGCATTCACGCACAGATCGAGAACGCTGGACGATTTGCGTTTAGCGGAACCTATATAAACAACACAAACACAGAAAGAATGGGGCACGGTATTTCTGGTGAATTGCGTGTTACACACTGCAACATACAAGGTGATCCTTCGATTGGCACATGGGTGCAGGCGTCAGCGTCGCTTCATTGCTCTTATGCTGAAATTCACTCAAATGCTTATGTTTCAGGGACTACAAAACCAAACACCGTGCCAAACATTGCGTCTGTTGGTGAGTTCGATGTCTATGATGGAACCATTTCTGACAGCAACGGGGCAAGACGTGTTCGCCTCGGTCAGGATTTTCAAACTGGAGGATATCAGACAAACGGTGGTGTGCCGCGCGAAACATACTCTGAAATATTTGCGACAAGGGTTGTTAATGCTGGTAATGGTTCTGCTGACAGAACGGTTGATATCAGCGCACTTGCCACTGTCACAGGGCAAATAACAGCACTTCAAAGCGCTGGGACGCTGACGTTTACAAATACAAATACAGCAATCGCAAAAGAGGGTAGGGATCTGTGTTTTGTTATCAATGCTTCTGGTGCGTGTTCGTTAGTTTTTGGTTCCGGGTTCCGCATGGTGAGTTCATCACCAATAAGCCTGAAAAACGCTCAAACAGCCGTTATCGAATTTAGATCTCAAGGTAACAAATATTATCAAAAAGGGCCTGTAAACATTATGGTGACGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
f206cc0ba4ede08296502fa9f6b4280ce4be7fe8f653e25d2ddee6e13b48cb5f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7454
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50