Protein

View in Explore
Genbank accession
AGG54528.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MPITINGNGSVTGISVGGLPDGIVDTDMIANEAVTPAKRGEHGILQIKQNSNTTAQINSVTSTSWATSTDAPYVDITPVGANSLYLLHAQWYMDAGADTIPALSFALSTDGGSNWTYNIHMKGYPNPTSYSGTNGNNYGAWMSWGGSMGTDGTGGGDGIRHYETLYKSSIAAGASDIRFACCYRNVYHNSMQHPIAMSTGTNPGCQLRVTEIRV
Physico‐chemical
properties
protein length:214 AA
molecular weight: 22623,80880 Da
isoelectric point:5,54529
aromaticity:0,08411
hydropathy:-0,27757

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage SS120-1
[NCBI] 		616674 Uroviricota > Caudoviricetes > Autographivirales > Banchanvirus SS1201 >
Host Prochlorococcus marinus subsp. marinus str. CCMP1375
[NCBI] 		167539 Bacteria > Cyanobacteria > Prochlorales > Prochlorococcaceae > Prochlorococcus > Prochlorococcus marinus

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGG54528.1 [NCBI]
Genbank nucleotide accession
HQ316584.1 [NCBI]
CDS location
range 15349 -> 15993
strand -
CDS
ATGCCAATAACAATTAATGGAAATGGTAGCGTCACAGGGATTTCTGTAGGCGGTCTACCAGACGGTATAGTAGATACCGATATGATAGCAAATGAAGCTGTCACTCCAGCAAAAAGAGGAGAACATGGGATTCTCCAAATAAAACAAAATAGTAATACCACTGCTCAAATTAACAGTGTTACAAGCACAAGTTGGGCAACAAGTACAGATGCACCTTATGTAGATATAACTCCAGTAGGTGCAAACTCTTTATATTTACTACATGCTCAATGGTATATGGATGCAGGAGCAGATACTATACCTGCACTATCATTTGCACTTAGTACAGATGGCGGATCAAACTGGACTTATAATATTCACATGAAAGGATATCCTAATCCTACAAGTTATAGTGGTACTAATGGTAATAACTATGGAGCTTGGATGTCTTGGGGTGGGTCAATGGGTACAGACGGAACAGGTGGAGGAGATGGTATTAGACATTATGAAACTTTATATAAATCTTCAATTGCAGCAGGTGCATCAGATATAAGATTTGCTTGTTGTTATAGAAATGTATATCACAACAGCATGCAACATCCTATTGCTATGAGTACTGGCACTAACCCCGGATGTCAATTGAGAGTAACGGAGATAAGAGTATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
0902f685fa0b8f54f8fad9b1bf527093c670b62c0521b61098afc1379a5ae3e5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6797
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Cyanophage P-SSP9 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Erlich,R., Young,S.K., Koehrsen,M., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Borenstein,D., Chen,Z., Engels,R., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heiman,D., Hepburn,T., Howarth,C., Jen,D., Larson,L., Lewis,B., Mehta,T., Park,D., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Walk,T., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C., Galagan,J. and Birren,B. 2011-09-23 — GenBank