Protein

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Genbank accession
XRX15353.1 [GenBank]
Protein name
DMT superfamily permease
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MNASTSPLPASDQTLRGILLICAAVFLFASHDGLSKFLSGFYPIVMVVWARYLVHTLLMVAVFVPRNGLAVIRSRRPLMQLARALCLIGTSLFFTTGLRYLPLAEATAVNFLAPLLVTALSVPLLKEKVSLGQWLAVLTGFIGVLFIVRPGGALFTPAALFPLGSALCFGLYQLLTRMLANSDSPTTSNFLAGIFNTLIMSLLVPFFWQTPSLLHGLMMIALGGCGMGGHLLLTQAFRHAPPATLAPFSYGQIIFAGLLGLLVFGHVPDAWSLLGILVICASGLVVAWRRGR
Physico‐chemical
properties
protein length:292 AA
molecular weight: 31326,28940 Da
isoelectric point:10,23186
aromaticity:0,10616
hydropathy:0,95240

Domains

Domains [InterPro]
PTHR22911
Unmapped
14–289
PTHR22911
IPR000620
STR
16–148
IPR000620 IPR000620
IPR037185
RBD
53–152
IPR037185 IPR037185
XRX15353.1
1 292
Architecture
STR
STR
STR 16-152 | STR 158-291 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XRX15353.1
1 292
Domain Start End Length (AA) Confidence
N-terminal 1 289 289 0,5307
Central domain 290 289 1 0,0718
C-terminal 290 292 2 0,8265
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-289
Central
290-289
C-terminal
290-292

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PaeM_GXNNB6
[NCBI] 		3413497 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XRX15353.1 [NCBI]
Genbank nucleotide accession
PV425003 [NCBI]
CDS location
range 41917 -> 42795
strand +
CDS
ATGAACGCATCCACCTCCCCGCTGCCCGCCAGCGACCAGACCCTGCGCGGCATCCTGCTGATCTGTGCCGCGGTGTTCCTGTTCGCCAGCCACGACGGGTTGTCCAAGTTCCTTTCCGGTTTCTACCCGATCGTCATGGTGGTCTGGGCCCGCTACCTGGTGCACACCCTGCTGATGGTCGCCGTGTTCGTGCCGCGCAACGGCCTCGCGGTGATCCGCAGCCGCCGTCCGCTCATGCAGTTGGCGCGGGCGCTGTGCCTGATCGGCACCAGCCTGTTCTTCACCACCGGCCTGCGCTACCTGCCCTTGGCCGAGGCGACCGCGGTGAACTTCCTGGCGCCGCTGCTGGTGACCGCGTTATCCGTGCCGTTGCTGAAGGAGAAGGTCAGCCTCGGTCAATGGCTGGCGGTGCTCACCGGCTTCATCGGCGTGCTCTTCATCGTGCGTCCCGGTGGCGCGCTGTTCACCCCGGCGGCGTTGTTCCCGCTCGGCTCGGCGCTGTGCTTCGGGCTCTACCAGCTGCTCACGCGGATGCTCGCCAACAGCGACAGCCCGACCACCAGCAACTTCCTCGCCGGCATCTTCAACACGCTCATCATGAGCCTGCTGGTGCCGTTCTTCTGGCAGACCCCAAGTCTTCTCCACGGCCTGATGATGATCGCCCTGGGCGGTTGCGGCATGGGCGGCCACCTGCTGCTGACCCAGGCCTTCCGCCATGCGCCGCCGGCGACCCTGGCGCCGTTCAGCTATGGCCAGATCATCTTCGCCGGCCTGCTCGGCCTGCTGGTGTTCGGCCACGTGCCGGACGCCTGGTCGCTGCTCGGCATCCTCGTCATCTGCGCCAGCGGCCTGGTGGTCGCCTGGCGCCGTGGCCGCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
ee2841fb7202af8a50865426c2d87759c82d37503b50585f48eacd29b9d0faf7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9422
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50