Protein

View in Explore
Genbank accession
XRX06028.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,86
TF
Evidence RBPdetect2
Probability 0,55
Protein sequence
MSILQKIVLGEPPSGSGGDNNRVAHIKTNENFGVVERSTPLDLRYLNDSTNLTPDDIGKRFGIWMAEPGKEVGFPLASSVPPNSCIHLFNVQGRVVIKFQAGDLSQLNVLNAGDWVKYVSDGVKIWHVAERGKMMWDEVVGGKLSVGGALDTGGDLSVARQSDEGHVVLGKMPGYLYGNSGSVGWWSSDAGGSYQYLLSDHTFRVNDEVVAVCDKGNALRFDWGKKTAGQLGATVDGKYLGYLWHSGNLAQPMTLDTPQFVGTKKTFTQAQEIAVGATGLHTQASLYLNGMGGLSYLGFSGLNNTVGAQLRISSNTSVAELQCVNYNATTFGVLTASNFNQASDSAFKSDIQTLENVMARLRGKRGVTFLQKSSPEAGRQAGVIANEWWDFPELLGEGPEIDEDGDFIVRQYDENGKELFGENGPPKGRPSLIFRYTNAVAVLLAGMLEMDAALQDAVKRIAELEAAK
Physico‐chemical
properties
protein length:468 AA
molecular weight: 50456,12900 Da
isoelectric point:5,23774
aromaticity:0,08761
hydropathy:-0,23013

Domains

Domains [InterPro]
DC_0954
ATT
3–152
DC_0954 IPR030392 DC_0869
DC_0745
STR
125–392
DC_0745 Coil
IPR030392
CHP
343–468
IPR030392
XRX06028.1
1 468
Architecture
ATT
STR
RBD
ATT 3-152 | STR 153-392 | RBD 393-468
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XRX06028.1
1 468
Domain Start End Length (AA) Confidence
N-terminal 1 53 53 0,9720
Central domain 54 252 200 0,2007
C-terminal 253 468 215 0,9909
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-53
Central
54-252
C-terminal
253-468

Taxonomy

  Name Taxonomy ID Lineage
Phage Burkholderia phage vB_E184
[NCBI] 		3412838 Viruses >
Host Burkholderia sp.
[NCBI] 		36773 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XRX06028.1 [NCBI]
Genbank nucleotide accession
PV072770.1 [NCBI]
CDS location
range 13107 -> 14513
strand +
CDS
ATGTCGATACTTCAAAAAATCGTCTTGGGCGAGCCACCCAGCGGAAGTGGCGGCGACAACAACCGCGTCGCGCACATCAAGACGAACGAGAATTTCGGTGTAGTCGAACGTTCGACTCCGCTCGATCTCAGGTATCTCAACGATAGTACGAACCTGACGCCGGACGATATCGGAAAGCGGTTCGGGATTTGGATGGCCGAGCCGGGAAAGGAAGTCGGGTTTCCGCTCGCGTCGTCCGTGCCGCCAAATTCCTGTATTCACTTGTTCAACGTTCAGGGAAGGGTCGTGATCAAGTTTCAAGCCGGCGACCTGTCTCAACTGAACGTGCTGAATGCCGGCGACTGGGTGAAGTACGTGTCGGACGGTGTGAAGATCTGGCACGTCGCGGAGCGCGGCAAGATGATGTGGGATGAGGTTGTCGGCGGCAAGTTGTCAGTCGGCGGCGCGCTGGATACTGGTGGTGATCTATCGGTTGCGCGTCAGAGCGACGAAGGGCACGTTGTACTAGGCAAGATGCCCGGCTATCTCTACGGCAACAGTGGGTCGGTGGGTTGGTGGTCTTCAGATGCCGGAGGATCGTACCAGTACCTACTCAGCGACCATACGTTTCGCGTCAACGACGAGGTAGTCGCGGTATGCGACAAGGGGAACGCCCTTCGATTCGACTGGGGGAAGAAGACCGCCGGCCAGCTCGGGGCGACGGTCGACGGCAAATACCTAGGCTATCTCTGGCACAGCGGTAATCTTGCCCAGCCGATGACACTTGACACGCCGCAGTTCGTTGGGACAAAGAAGACGTTCACGCAGGCGCAGGAAATCGCTGTCGGTGCCACCGGGCTTCATACGCAAGCGTCGCTGTACCTGAACGGAATGGGCGGTCTCAGCTATCTCGGATTCTCTGGGCTGAACAACACCGTTGGCGCTCAGCTTCGGATTTCCAGCAACACCTCGGTCGCTGAATTGCAGTGCGTCAACTACAACGCGACAACGTTCGGGGTGTTGACCGCTTCGAATTTCAATCAGGCGTCCGATAGTGCTTTCAAATCCGATATCCAGACGCTTGAGAACGTAATGGCGCGGCTGCGCGGTAAGCGGGGCGTGACGTTTCTGCAAAAAAGCAGTCCGGAAGCGGGGCGACAGGCTGGCGTCATCGCAAACGAGTGGTGGGATTTCCCGGAACTGCTCGGCGAGGGGCCCGAGATCGACGAGGACGGCGATTTCATCGTGCGGCAGTACGACGAGAACGGCAAGGAGCTCTTCGGCGAGAACGGGCCGCCGAAGGGGCGGCCATCGCTGATCTTTCGGTACACGAACGCCGTCGCGGTCTTGTTGGCGGGGATGCTTGAGATGGACGCCGCGTTACAGGACGCGGTCAAGCGGATTGCCGAATTGGAGGCAGCGAAGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
95ce72d9c884c4d0b81a1ac47db0ec826a2c45b26df581601ff5e2541e4d84b6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7551
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50