Protein

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Genbank accession
YP_009856817.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,72
Protein sequence
MATVVRKTPDQLSGLGATIQANYSLQDYAYDYAVAGIPFLSGVQDNRPYTERMAEIRKQQFDAFAEPGEQSISGNFWWLRSQSSFTGGAGILYQDPDNDNQFNIRFDSSLGVDPWTSGQLKLLRSVTAGTETAKTRLLVRGYVDPSGVDAYWLVRDDELRKVTDAADTAVIGITLDSIHDITSSGATYFIARTDGIHYGLDAAAPTQLYTDALNDSAIIEFVKGRLIVAHDNKVYQGVTGGAAAALPAEIYEHQDDQWTWKSITDGPAAIYVAGDSGTTSEIHRFSPTLSATGVPELTWTGVTATMPSGEIINTIYQYVGSFVGIATNKGFRVGEIDSNGDISYGPLLFEPTGGCTGIVGYDRFMWTGTTAQHDGDSGLYRVDLGSVIQEQTTRAVRYAYARDIYTTESAGAVTSVTMFGASDRKVFSVSGFAAVKEEATQLVESGYLETGRIRFNTEEPKLFKFFSVRTPAPLQETCLYPFYPEWRRDSVHHLHSSFRLRSDGRRHRKPCR
Physico‐chemical
properties
protein length:512 AA
molecular weight: 56285,89050 Da
isoelectric point:5,17743
aromaticity:0,11133
hydropathy:-0,30117

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009856817.1
1 512
Domain Start End Length (AA) Confidence
N-terminal 1 351 351 0,3705
Central domain 352 501 151 0,2411
C-terminal 502 512 10 0,9900
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-351
Central
352-501
C-terminal
502-512

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptomyces phage JXY1
[NCBI] 		2708562 Uroviricota > Caudoviricetes > Beephvirinae > Manuelvirus JXY1 >
Host Streptomyces lividans
[NCBI] 		1916 cellular organisms > Bacteria > Bacillati > Actinomycetota > Actinomycetes > Kitasatosporales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009856817.1 [NCBI]
Genbank nucleotide accession
NC_048854 [NCBI]
CDS location
range 41614 -> 43152
strand -
CDS
GTGGCAACCGTCGTTCGCAAGACACCAGACCAGCTCAGTGGTCTGGGTGCAACCATCCAGGCCAACTACAGCCTTCAGGATTACGCGTATGACTACGCTGTCGCAGGCATCCCGTTCCTCTCTGGAGTGCAGGACAACCGTCCATATACTGAGCGCATGGCGGAGATTAGGAAGCAGCAGTTCGACGCTTTCGCTGAGCCGGGAGAGCAGTCCATCAGTGGTAACTTCTGGTGGCTGCGCTCCCAGTCCAGCTTCACTGGTGGCGCTGGCATCCTCTACCAGGATCCCGACAACGACAACCAGTTCAACATCAGGTTCGACAGTAGCCTAGGTGTGGATCCCTGGACCTCTGGTCAGCTCAAGCTGCTCAGGTCCGTCACCGCTGGCACCGAGACCGCCAAGACTCGACTGCTAGTGCGTGGATACGTCGACCCTTCAGGGGTCGACGCTTACTGGCTAGTGCGTGACGACGAGCTACGCAAGGTGACCGATGCTGCCGATACGGCAGTCATTGGCATCACCCTTGACAGCATTCACGACATCACCTCAAGCGGAGCCACGTACTTCATCGCAAGGACTGACGGGATTCACTATGGCCTGGATGCGGCTGCACCGACTCAGCTCTACACTGACGCACTGAATGACAGTGCGATCATCGAGTTCGTCAAGGGGCGACTGATCGTGGCCCACGACAACAAGGTGTATCAGGGTGTGACTGGCGGTGCGGCAGCGGCGCTGCCTGCCGAGATCTACGAGCACCAGGATGACCAGTGGACGTGGAAGTCCATCACTGACGGACCGGCCGCGATCTACGTCGCGGGCGACTCTGGCACTACGTCTGAGATCCATCGCTTCAGTCCGACACTGTCAGCTACCGGAGTTCCGGAGCTGACGTGGACTGGCGTGACGGCAACCATGCCGTCTGGCGAGATCATCAACACGATCTACCAGTACGTAGGGTCGTTCGTCGGTATCGCCACGAACAAGGGCTTCAGGGTTGGAGAGATCGACAGCAATGGCGACATCTCCTATGGCCCACTCCTGTTCGAGCCGACCGGTGGATGCACCGGAATCGTAGGCTACGACAGGTTCATGTGGACTGGCACCACCGCTCAGCATGATGGCGACTCTGGTCTGTATAGGGTTGATCTTGGATCCGTGATTCAGGAGCAGACCACGAGGGCCGTACGCTATGCGTACGCCCGCGACATCTACACCACCGAGAGCGCCGGTGCCGTCACATCCGTGACCATGTTTGGTGCTAGCGACAGGAAGGTGTTCTCTGTCTCCGGCTTTGCGGCAGTCAAGGAGGAGGCGACTCAGCTAGTCGAGTCCGGCTACCTTGAGACTGGGCGAATCAGGTTCAACACCGAGGAGCCCAAGCTGTTCAAGTTCTTCTCCGTCCGCACGCCAGCTCCGCTACAGGAAACCTGTCTGTATCCGTTCTATCCGGAGTGGCGGCGAGATTCCGTACATCACCTACACTCCAGCTTCCGGCTCCGGAGTGATGGACGTCGGCATCGGAAACCCTGCCGGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
9f45fc1a2e5cbb6ed801cc673b3a509e2eb7b493d0d7b37476e1cfc44effb620
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6077
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50