Protein

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Genbank accession
QXV84820.1 [GenBank]
Protein name
long tail fiber proximal hinge connector
RBP type
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MEKFMAEFGQGYVQTPFLSESNSVRYKISIAGSCPLSTAGPYVKFQDNPVGNQTFSAGLHLRVFDPFTGALVDSKSYAFSTSNDTTSAAFVSFMNSLTNNRIVAILTNGKVNFPPEVVSWLRTAGTSAFPSDSILSRFDVSYAAFYTSSKRAIALEHVKLSNRKSTDDYQTILDVVFDSLEDVGATGFPRRTYESVEQFMSAVGGTNNEIARLPTSAAISKLSDYNLIPGDVLYLKAQLYADADLLALGTTNISIRFYNASNGYISSTQAEFTGQAGSWELKEDYVVVPENAVGFTIYAQRTAQAGQGGMRNLSFSEVSRNGGISKPAEFGVNGIRVNYICESASPPDIMVLPTQASSKAGKVFGQEFREV
Physico‐chemical
properties
protein length:371 AA
molecular weight: 40216,50580 Da
isoelectric point:5,27076
aromaticity:0,11321
hydropathy:-0,12102

Domains

Domains [InterPro]
DC_0912
STR
1–371
DC_0912
PS52031
LEC
22–192
PS52031
IPR039477
STR
58–126
IPR039477
QXV84820.1
1 371
Architecture
STR
STR 1-371
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QXV84820.1
1 371
Domain Start End Length (AA) Confidence
N-terminal 1 68 68 0,6559
Central domain 69 267 200 0,4502
C-terminal 268 371 103 0,5284
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-68
Central
69-267
C-terminal
268-371

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage TadeuszReichstein
[NCBI] 		2852015 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli K-12
[NCBI] 		83333 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QXV84820.1 [NCBI]
Genbank nucleotide accession
MZ501106 [NCBI]
CDS location
range 59931 -> 61046
strand +
CDS
ATGGAAAAATTTATGGCAGAGTTTGGACAAGGATATGTCCAAACTCCATTTTTATCGGAAAGCAATTCAGTAAGATACAAAATAAGTATAGCGGGTTCTTGCCCGCTTTCTACTGCAGGACCATATGTTAAATTTCAGGATAATCCTGTAGGAAATCAAACATTTAGCGCAGGTCTTCATTTAAGAGTTTTTGACCCTTTCACAGGAGCATTAGTTGATAGTAAGTCATATGCTTTTTCGACTTCAAATGATACTACATCAGCTGCTTTTGTTAGTTTCATGAATTCTTTGACGAATAATCGAATTGTTGCTATATTAACTAACGGAAAGGTTAATTTTCCTCCTGAAGTAGTATCTTGGTTAAGAACCGCCGGAACGTCTGCCTTTCCATCTGATTCTATATTGTCAAGATTTGACGTATCATATGCTGCTTTTTATACTTCTTCTAAAAGAGCTATTGCATTAGAGCATGTTAAACTGAGTAATAGAAAAAGCACAGATGATTATCAAACTATTTTAGATGTTGTATTTGACAGTTTAGAAGACGTCGGAGCTACCGGATTTCCAAGAAGAACGTATGAAAGTGTTGAGCAATTTATGTCGGCAGTCGGTGGAACTAATAACGAAATTGCGAGATTGCCAACTTCAGCTGCTATAAGTAAATTATCTGATTATAATTTAATTCCTGGTGATGTTCTTTATCTTAAAGCACAGCTATATGCTGATGCTGATTTACTTGCTCTTGGAACTACGAATATATCCATTCGATTTTATAATGCATCTAATGGATATATTTCCTCGACACAAGCTGAGTTTACTGGGCAAGCTGGGTCATGGGAATTAAAGGAAGATTATGTAGTTGTTCCAGAAAACGCAGTAGGATTTACGATATATGCACAAAGAACTGCGCAAGCTGGCCAAGGTGGCATGAGAAATTTAAGCTTTTCTGAAGTATCAAGAAACGGCGGTATTTCAAAACCTGCTGAATTTGGCGTCAATGGTATTCGTGTTAATTATATCTGTGAATCTGCTTCACCTCCGGATATAATGGTACTTCCTACGCAAGCATCGTCTAAAGCTGGTAAAGTGTTTGGACAAGAATTTAGAGAAGTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
41d034bc0abf69d6a033f89b37996c7ce0a9d4b4d6739bdf5dfd905078313738
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6770
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Systematic exploration of Escherichia coli phage-host interactions with the BASEL phage collection Maffei,E., Shaidullina,A., Burkolter,M., Heyer,Y., Estermann,F., Druelle,V., Sauer,P., Willi,L., Michaelis,S., Hilbi,H., Thaler,D.S. and Harms,A. 2021 — GenBank