Protein

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Genbank accession
YP_010682057.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MQQTEAEGRLNLYDDVTPLEKTKNINVLTAAIRKKTRGADVREAIATSIETTYADSIANGNTNMEVAKARGTYNTLGDRLENFNTEIRNIVSCSPKGIYANLSELQSAKPNGDSGIYLTTDNGHWYYYANGWKDGGMYQAAGIADGSVKFSSIDKKDFNVQFDPKLKVVYKPNLNSWMNADNPTENATKIYMIPFRGAGKVTVSFYGSLFPGVKSQIKLVKKATNSSNYCVSLNEKTITETTEGGYTTITFNHPVPKGEYFIAFCGINFRWNFGYSYWLESSSGYNQSIFLQRKTENRCIDAVIACDFSVDSSGEKLLDENMHFDSGIFSSHTEPILYIPNYELPIGTKSIILGTKNNTPVFIFRKNENNTFEKIKQIYTEEIGEGARYRKYFLDIVAEKDMYVGVFGNVYYDTSGDVSAKKGHFEKDISASDSENIGSMYFNPNTNIHMVPILYYDENLINVAQKNANSFEEINGSLIDITNKINKINKKTITLTNIIRKMKRGNAVTISLYGDSTYYGHKSGAVPLGTRTSEPVSESLQKYLRAYFLNENITVNNYATNGRQAQQDSDDWDTKMANDKADVIFINFGINDSNSGKTAETFYSQMETLVQGALKTNKAVILETANQVLTFDKGSQGMGDYTKAFNIKEFVDVTRQLVKSYNIYLLDGYKRSLSYINEFFNPTIALPDGMHPSDDMYKYKAVQMMSMFTNTSFSKLKSGQTLSILEANFNTTTPNSVADSSSKFGFKYTVKDISVSFGLEKQSDIKIYIKSTASMKVYVNGLDTQYISSDGYIVIKNIHSNDVFIQITSDEATDVYGLEVV
Physico‐chemical
properties
protein length:821 AA
molecular weight: 92025,21870 Da
isoelectric point:6,00160
aromaticity:0,11571
hydropathy:-0,42460

Domains

Domains [InterPro]
DC_0719
STR
1–798
DC_0719
IPR051532
Unmapped
468–697
IPR051532
IPR036514
STR
508–719
IPR036514
SSF52266
STR
508–707
SSF52266
cd00229
ENZ
510–706
cd00229
IPR013830
ENZ
513–698
IPR013830
YP_010682057.1
1 821
Architecture
STR
STR 1-798 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010682057.1
1 821
Domain Start End Length (AA) Confidence
N-terminal 1 157 157 0,9900
Central domain 158 381 225 0,6353
C-terminal 382 821 439 0,3292
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-157
Central
158-381
C-terminal
382-821

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage SW24
[NCBI] 		2483877 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus thermophilus
[NCBI] 		1308 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010682057.1 [NCBI]
Genbank nucleotide accession
NC_071055.1 [NCBI]
CDS location
range 16364 -> 18829
strand +
CDS
ATGCAACAAACAGAAGCAGAGGGACGTTTGAACCTCTACGATGATGTGACGCCGTTGGAAAAAACCAAAAACATTAATGTTTTGACAGCGGCTATCAGAAAAAAAACAAGAGGGGCAGATGTCCGTGAAGCCATCGCTACGTCTATTGAAACGACTTACGCAGATAGTATCGCTAACGGAAATACCAACATGGAAGTCGCTAAGGCAAGAGGAACATATAATACTCTAGGAGATAGACTTGAAAATTTTAATACTGAAATCAGGAATATTGTAAGTTGTTCACCAAAAGGAATATATGCTAATCTATCAGAGCTACAATCGGCTAAGCCGAACGGAGATTCCGGAATCTATCTCACAACAGACAACGGCCATTGGTACTATTATGCTAACGGTTGGAAAGATGGTGGCATGTATCAGGCGGCGGGGATTGCTGATGGAAGCGTGAAGTTTTCTTCAATCGATAAAAAAGATTTTAACGTTCAGTTTGACCCGAAATTGAAAGTCGTATATAAGCCAAATTTAAATTCTTGGATGAATGCAGATAATCCCACCGAGAACGCCACAAAAATTTATATGATTCCATTTAGAGGCGCAGGCAAAGTGACCGTTAGTTTTTATGGATCCCTGTTTCCTGGCGTAAAATCGCAAATAAAGTTAGTCAAAAAGGCTACTAATTCAAGTAATTATTGTGTGTCTCTCAATGAAAAAACCATAACTGAAACGACAGAAGGCGGATATACAACAATTACGTTCAATCATCCAGTTCCTAAAGGCGAATATTTTATCGCTTTTTGTGGAATTAATTTCAGATGGAATTTTGGATATAGTTATTGGTTAGAAAGCTCTTCAGGTTACAATCAGTCGATTTTTTTACAAAGAAAGACAGAAAATAGATGCATAGATGCTGTTATTGCTTGTGATTTTTCTGTTGATTCTAGCGGTGAGAAATTATTAGACGAAAATATGCACTTTGATTCAGGTATATTTTCGTCTCACACTGAACCTATTTTATATATTCCTAATTACGAATTGCCTATCGGAACAAAATCTATAATTCTTGGGACTAAAAACAATACACCTGTTTTCATTTTTAGAAAAAATGAAAATAATACGTTTGAAAAAATAAAACAAATATACACAGAAGAAATAGGTGAAGGAGCACGTTATAGAAAATACTTTTTAGACATTGTTGCTGAAAAAGATATGTATGTCGGAGTTTTTGGAAATGTTTATTATGATACTTCTGGTGATGTTTCTGCAAAGAAAGGACATTTCGAAAAAGATATTTCGGCTTCAGATTCTGAAAATATAGGGTCAATGTATTTCAATCCAAATACAAATATTCACATGGTTCCTATTTTATATTATGATGAAAATTTAATTAATGTTGCACAAAAAAATGCGAATTCATTTGAGGAAATAAATGGATCGCTAATTGATATCACCAATAAAATAAATAAAATAAATAAAAAAACAATAACATTAACAAACATAATCAGAAAAATGAAAAGAGGGAATGCAGTCACTATTTCGCTTTACGGAGACTCAACGTACTATGGTCATAAGTCAGGCGCTGTCCCTTTAGGCACTAGAACAAGCGAGCCTGTTTCTGAAAGTTTGCAAAAATATCTACGTGCTTATTTTTTGAACGAAAATATAACAGTAAACAACTATGCAACTAACGGAAGACAAGCACAACAAGATTCAGATGATTGGGACACAAAAATGGCTAATGACAAAGCGGACGTTATTTTTATAAATTTCGGGATAAACGATTCAAATTCCGGTAAAACAGCAGAAACTTTTTACAGTCAAATGGAAACTTTAGTACAAGGTGCGCTGAAAACGAACAAAGCAGTCATCTTAGAAACTGCTAATCAAGTCTTAACTTTTGACAAAGGAAGTCAAGGGATGGGAGACTATACGAAAGCTTTTAACATTAAAGAATTTGTTGATGTAACAAGACAGTTAGTTAAGAGTTATAATATTTATTTGCTTGATGGATATAAACGTTCATTAAGCTACATTAACGAATTTTTTAATCCCACAATAGCTTTGCCGGACGGCATGCATCCGTCAGACGATATGTATAAGTATAAAGCTGTTCAAATGATGTCTATGTTTACTAATACGAGTTTTTCAAAATTAAAATCAGGACAGACATTATCTATTTTAGAAGCTAATTTTAATACAACAACACCAAATTCAGTAGCGGATAGCAGTTCTAAATTCGGTTTTAAATATACGGTTAAAGACATCTCGGTATCATTTGGACTAGAAAAACAATCAGATATTAAAATTTATATCAAAAGCACAGCATCAATGAAAGTTTATGTTAATGGTTTAGATACTCAATATATTAGCTCTGATGGATATATCGTAATAAAAAATATTCACTCTAACGATGTATTCATTCAGATCACTTCAGACGAAGCGACAGATGTTTATGGTTTAGAAGTGGTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
305fab421d88fbf5ff4661a57423b808ac03408b0c0636c09fff0cdbc193fe0f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7068
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Biodiversity of Streptococcus thermophilus Phages in Global Dairy Fermentations Lavelle,K., Martinez,I., Neve,H., Lugli,G., Franz,C., Ventura,M., Bello,F., Sinderen,D. and Mahony,J. 2018 — GenBank