Protein

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Genbank accession
WHM52756.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MTQRTGITEITAPVAAGSPDTPLAVHFNNEQQGGLKLFNTEAEMQGFKVKFKSRLFGSVAIVPADTGDQFSVYRWNGTQTDGSDGDWVEMSAEGFDGMTFVNADGSSTTGIQMLALSGITLEGNEKDGFTLKVSGGAGGGVTFEERVNYAQYDNIKRVLVGPYLELNALRDKQGGPATGVEIGVKPDTFELRKTPGFLSYVQYPELVYGKMKDGNFSRKGAIWPELLKVSPEGFLQIDRANKAIGLQDTNPLDDPNVSGGSKFLVWPFVYLEGVAPDDGYVELRFVKKDDHSIAEDIDGHAMAVRHNYKAGDVLTPKHEPLMFTQVIAAKGVTEYQLVIVDNFDEYVKVLDYTDGPSGLCIQELRTTGSSSEALIRAEIDTGFSVRVDSYYVGTYLASINYLTSMQEPAVKVDAGEKASTVAGIQMHAITDLMYSVEQGMIKVNDYNGNVCDFYLGLEIPSDLSRVLAGEGLEVELSLQDKDSGWKIGFFSYKGDMGSVPNIFDRRDQGSIVLNKGWSEWHSGFIPEDAVSGLHTAQESATVPKDADYVVIAVYPVSAQSPISFNLKAFHVDAANPHDDYTINPIRITGLQHLDFMTETVKLVQDTQGYASLRYTINNDDAGNPMPLGIPESKLKFMHLDKTKNIVSGSGAKGGEGALVADNEIDVTVSQKWQLYNEQMSASTTEFWLMLYKAGDGSVSEVPNSRTTFTVESKRPGVDYFTTNEVTINMEPGDYIYARSKSDSVDGAYTQTTQESKPLCITYVTEKALAP
Physico‐chemical
properties
protein length:770 AA
molecular weight: 84152,23370 Da
isoelectric point:4,67838
aromaticity:0,09610
hydropathy:-0,29273

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_VpaS_1601
[NCBI] 		3038270 No lineage information
Host Vibrio parahaemolyticus
[NCBI] 		670 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WHM52756.1 [NCBI]
Genbank nucleotide accession
OQ719603.1 [NCBI]
CDS location
range 56856 -> 59168
strand -
CDS
ATGACTCAACGTACAGGCATTACAGAAATTACTGCACCAGTGGCTGCTGGTAGCCCAGATACTCCGCTGGCTGTACACTTCAACAATGAGCAGCAGGGCGGGTTGAAGCTGTTTAACACGGAAGCCGAGATGCAGGGATTTAAGGTCAAGTTCAAATCTCGGCTGTTTGGCTCTGTCGCCATTGTCCCTGCTGACACTGGCGATCAGTTTTCTGTATATCGTTGGAACGGTACACAGACAGACGGCAGCGACGGTGATTGGGTTGAGATGAGTGCTGAAGGTTTCGACGGTATGACGTTCGTCAACGCTGACGGAAGCAGTACCACAGGCATTCAGATGTTGGCGTTAAGCGGAATCACTTTGGAAGGTAATGAGAAAGACGGCTTCACGCTAAAAGTTTCTGGTGGAGCTGGAGGAGGCGTCACCTTTGAAGAGCGCGTAAACTACGCGCAGTATGACAACATTAAGCGAGTTTTAGTAGGTCCATACCTAGAGCTTAACGCCCTAAGAGACAAGCAGGGCGGACCCGCAACTGGGGTAGAGATAGGGGTAAAGCCGGACACTTTCGAGCTTAGGAAGACTCCTGGATTTTTGTCCTACGTCCAATACCCTGAACTTGTTTACGGCAAGATGAAAGATGGAAACTTCTCGCGCAAAGGGGCTATTTGGCCTGAACTGCTTAAGGTCAGCCCTGAAGGGTTCCTGCAGATAGATAGGGCCAATAAAGCAATAGGTCTACAAGACACCAATCCGCTAGACGATCCTAACGTCAGCGGAGGCAGTAAATTTTTAGTTTGGCCATTCGTGTATCTGGAGGGTGTTGCACCTGATGACGGCTACGTAGAACTTCGTTTCGTCAAGAAAGATGACCATTCCATAGCTGAAGATATCGATGGTCATGCTATGGCAGTAAGACACAATTACAAAGCTGGTGACGTTCTAACGCCTAAACATGAGCCTTTGATGTTTACTCAGGTTATAGCTGCAAAAGGCGTTACGGAATACCAGCTAGTTATAGTGGACAACTTCGACGAGTATGTGAAGGTGCTTGACTATACTGACGGGCCTAGCGGACTGTGTATTCAAGAGTTGCGCACTACAGGTAGTTCAAGCGAAGCTCTTATTCGTGCAGAAATTGATACAGGGTTTAGCGTTAGAGTTGATAGCTACTATGTAGGGACATACTTAGCCAGCATAAACTACCTAACTTCTATGCAAGAGCCAGCAGTGAAGGTTGACGCAGGTGAGAAGGCCAGCACTGTAGCTGGAATACAGATGCACGCTATTACCGACCTCATGTACAGCGTAGAGCAAGGCATGATTAAAGTTAACGACTACAACGGTAACGTATGCGATTTCTATCTAGGTTTAGAGATACCTTCAGATCTGTCAAGGGTGTTAGCGGGTGAAGGTTTAGAGGTAGAGTTGTCCCTTCAAGACAAGGATTCAGGCTGGAAGATTGGGTTCTTCTCGTACAAAGGGGATATGGGATCTGTACCCAACATATTTGACAGAAGAGACCAAGGATCTATCGTACTGAACAAAGGTTGGTCAGAGTGGCACTCAGGGTTCATCCCTGAAGACGCTGTGTCCGGTCTGCATACTGCACAGGAATCGGCCACCGTACCAAAAGATGCTGACTACGTCGTAATAGCTGTGTACCCTGTGTCAGCGCAGTCGCCTATAAGCTTCAACTTGAAGGCATTTCACGTAGACGCAGCCAATCCTCACGATGACTACACGATAAATCCTATCCGTATCACTGGGCTACAGCACCTAGACTTCATGACAGAGACGGTGAAGCTTGTGCAAGACACTCAAGGGTACGCTAGTCTGCGATACACGATAAATAACGATGATGCAGGTAACCCAATGCCTCTAGGCATACCTGAGTCTAAGTTGAAGTTCATGCATTTAGATAAGACTAAGAACATTGTCTCTGGAAGCGGCGCTAAAGGAGGAGAAGGAGCTTTGGTGGCTGACAACGAAATAGACGTCACCGTCAGTCAGAAGTGGCAACTGTACAATGAACAGATGTCTGCCTCTACTACAGAATTTTGGCTGATGCTGTACAAAGCAGGCGACGGCAGTGTCTCAGAAGTCCCTAACAGTAGAACGACTTTCACGGTAGAGTCTAAACGTCCCGGCGTGGACTACTTCACCACCAACGAAGTGACGATTAATATGGAGCCGGGGGATTACATCTATGCTAGGTCTAAGTCTGACAGCGTAGACGGCGCATACACGCAGACAACACAGGAGTCTAAGCCCCTGTGTATCACTTACGTCACAGAGAAAGCTTTAGCCCCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1c2d9ad5fb30bad25d44b0c1e6c2612e2c1535fbda19961d7f53c890e486ec26
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7695
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50