Protein

View in Explore
Genbank accession
XQW41533.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
Protein sequence
MDILSTLFQQQSRKIGMIVPSVVVSEKHTDTLEITEHPVEVGAAIADHAYKKPSEVVMEVGFAGGGSLLDFASNLTATSLLGLSPQQTYQEILDLQASRIPFDVVTGKRLYSNMLIRALEVTTDKTTENVLSAVLTLREVLISQTQQITVADKTSMKDGASTSAVLNTGNKTTKPPNTSLLKSITGNAASLLGLG
Physico‐chemical
properties
protein length:195 AA
molecular weight: 20773,52790 Da
isoelectric point:5,59861
aromaticity:0,03590
hydropathy:0,04051

Domains

Domains [InterPro]
DC_0601
STR
1–193
DC_0601
IPR048494
ATT
21–150
IPR048494
XQW41533.1
1 195
Architecture
STR
ATT
STR
STR 1-20 | ATT 21-150 | STR 151-193 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Yersinia phage YP3
[NCBI] 		3388565 Viruses >
Host Yersinia ruckeri
[NCBI] 		29486 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XQW41533.1 [NCBI]
Genbank nucleotide accession
PV092592.1 [NCBI]
CDS location
range 6355 -> 6942
strand -
CDS
ATGGATATTCTCTCTACTCTCTTTCAACAGCAGAGCCGGAAAATAGGGATGATTGTCCCCAGCGTGGTTGTTTCTGAGAAGCACACCGACACGCTGGAGATAACCGAGCACCCTGTCGAGGTTGGGGCCGCCATCGCCGACCATGCCTACAAAAAACCGTCTGAAGTGGTGATGGAGGTCGGTTTCGCTGGTGGCGGATCGCTGCTGGATTTTGCCAGTAATCTGACGGCTACCAGCCTGCTCGGTCTGAGCCCCCAGCAGACGTATCAGGAGATACTCGACCTGCAGGCGAGCCGTATCCCTTTCGATGTGGTAACCGGCAAACGGCTGTACAGCAACATGCTGATCCGCGCGCTGGAAGTGACGACAGACAAGACAACCGAAAACGTCCTGTCTGCCGTCCTCACCCTGAGGGAGGTTCTTATCTCGCAGACGCAGCAGATTACCGTCGCGGATAAAACCAGCATGAAGGACGGGGCCAGCACGTCGGCGGTACTGAATACCGGCAACAAAACCACAAAGCCGCCAAATACCTCGCTGCTGAAAAGCATCACGGGTAACGCGGCGTCATTACTGGGGCTCGGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a194ebf9ffd82032ae3d772e3bc88e251bcb2e7ed4a1561a4967a9360780c63f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7882
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Yersinia ruckeri bacteriophage YP10S2 whole genome sequence Altinok,I., Ture,M., Cebeci,A., Ozturk,R.C. and Ustaoglu,D. 2023-03-01 — GenBank