Protein

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Genbank accession
QOI71196.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MIPCTGTIKASDINTELGRTPTSIFQIGNTPERTLAGKPSGLIKFSDFYCKSSADPLPWFLYEVQQTGGRGVNKDPAVFRVIDGSYSVFWGGSNGWLKFNNHFTGTIRQIEVTWKYSGRNGGWHGITVYERTNSASTYRLGSNTGIQKFVLDVNIPADQEIWLNWSGGGDQGDGNNVDYVAITNVVYY
Physico‐chemical
properties
protein length:188 AA
molecular weight: 20792,90130 Da
isoelectric point:6,71873
aromaticity:0,13298
hydropathy:-0,36915

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QOI71196.1
1 188
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,6606
Central domain 11 177 168 0,3453
C-terminal 178 188 10 0,9312
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-177
C-terminal
178-188

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage pEa_SNUABM_12
[NCBI] 		2768773 Uroviricota > Caudoviricetes > Eneladusvirus >
Host Erwinia amylovora
[NCBI] 		552 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QOI71196.1 [NCBI]
Genbank nucleotide accession
MT939486 [NCBI]
CDS location
range 187283 -> 187849
strand +
CDS
ATGATACCATGTACTGGAACGATAAAAGCATCAGATATTAATACTGAATTGGGAAGAACACCAACATCTATATTTCAAATTGGAAATACACCAGAAAGAACTCTTGCAGGTAAGCCATCTGGTTTGATAAAATTTAGTGATTTCTATTGTAAATCATCTGCTGATCCGTTACCTTGGTTCTTATATGAGGTACAGCAAACTGGTGGTCGTGGTGTAAACAAAGACCCAGCAGTATTCCGTGTTATTGATGGTAGCTATTCTGTATTTTGGGGTGGTAGTAACGGTTGGTTGAAGTTTAACAATCACTTCACTGGTACTATTCGTCAAATTGAAGTTACTTGGAAATATTCTGGCAGAAATGGTGGTTGGCATGGTATAACTGTTTATGAACGTACCAATTCTGCAAGTACTTACAGATTAGGTAGCAATACGGGAATCCAAAAATTTGTTTTAGATGTTAACATACCAGCCGATCAAGAGATATGGTTGAATTGGTCTGGTGGTGGTGATCAGGGTGATGGTAACAACGTAGATTATGTAGCTATCACTAATGTAGTTTATTACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b6f66693659b0a18f4c5cc4cb25db10fbfa2076581c4bc03801c13f6df983f73
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5308
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Erwinia phage pEa_SNUABM_12 Kim,S.G., Lee,S.B. and Park,S.C. 2021-01-07 — GenBank