Protein

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Genbank accession
WDQ27567.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MNDQDKMQLALASMHTGQWFGFDGEINYENLIILDSSKTKPTEDEINTKIQEMENKITTIENLKKSAKAKLIAGEPLTEEEADTIVL
Physico‐chemical
properties
protein length:87 AA
molecular weight: 9813,98440 Da
isoelectric point:4,48075
aromaticity:0,04598
hydropathy:-0,56897

Domains

Domains [InterPro]
Coil
Unmapped
43–70
Coil
WDQ27567.1
1 87
Architecture
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage EXVC031P Hodr
[NCBI] 		3029570 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Candidadtus Pelagibacter sp. HTCC1062
[NCBI] 		198252 Pseudomonadota > Alphaproteobacteria > Candidatus Pelagibacterales > Candidatus Pelagibacteraceae > Candidatus Pelagibacter >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WDQ27567.1 [NCBI]
Genbank nucleotide accession
OQ414635.1 [NCBI]
CDS location
range 21239 -> 21502
strand -
CDS
ATGAATGATCAAGATAAAATGCAACTAGCTTTAGCCTCAATGCATACTGGACAATGGTTTGGATTTGATGGAGAAATAAATTATGAAAATTTAATTATTTTAGACAGTAGTAAAACAAAACCTACTGAAGATGAAATCAATACTAAAATTCAAGAAATGGAAAATAAAATTACAACTATAGAAAATTTAAAAAAAAGTGCTAAAGCAAAGTTAATTGCTGGAGAACCTCTTACAGAAGAAGAGGCAGATACAATAGTATTATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
2cc6273c1f57d709e77328c62e6dac0ee450c5b73783748c693adb2bb44395d7
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9274
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Draft Genome Sequences of Pelagipodophages Hodr EXVC031P and Baldr EXVC032P, Isolated from the Sargasso Sea Lewis,P.J., Buchholz,H.H., Michelsen,M.L. and Temperton,B. 2014-05 — GenBank