Protein

View in Explore
Genbank accession
YP_009843950.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MAKQKGDIRRQASLGTELKRNINNNNSTSDLVLARVSKVDYENNSIEYIVQTNGMNNSSGAISNGGARLPVSFGGKNGYGNPYGSVNTIRVNDIVLIGFVGGKKNSPIVISKYLSDEDAYMLSDYSGDQYMAPNDEDMYDKTNSYRDLYPDLTYSYHNGNGYYEHTFSGNSFLVMDDYDIKGNFVDYPVGEVDASTYYSLRGNKYKDGTNFDTLNYLAPNIFFKHQGSYLLDDNGEEKLDHHQTNVSISPQGTTRLTTFHDDDKWLSLFSIDGDNGEISLTRENDNSINIGDTSDSNATFTIDKDNNLILSSGNTKMTLSDGHHIIASDLDTDSDKIDLYQSALNNKNSISGINNSINSINNNMSSSSSSLSTVNDQVNMSASSISQTNAIASSIYGNATTSVNMFSLASSIANTEIDSNTGFYKENNGSLSTPKMAAIRNFTYILTAYSVTSPVTIKIAFYDLNKNFINEKEITGNTGDVSISSVSPDNSVYISASVSSNAFKVKLEQADKVTSWSPSIVDLYTNNNTVLELLSAAKIAQADTNAKMSTVTSNNYLNSLLQYNNDSQILASDKDSLANSWDLFKADYKVVVSYATKYSVDLTTANSYYTPLENSIEKDILVDRTSNSPAGAYTINIKGLQSALDKVIPNIISSALNSVITAQNTLATNTSSYRNLLLGTTTNISATGDQKLYSLSNGASQISGSTILSFTFNTTDVNSNFSINEVILNNDGSINKEVVLIDNLPNNMTNNVVSSFIQPIVPTLNQKADIYIRFSSYRQPVQISNMIMATSNTTKVTWVAAPEDISNTTTDKLATFKITDDQITSAVFDHLLEQSDVFTQTAEKAQIAVTQGDVSAGLSIEAGKMVWFGKEIDILGDIVDNNKITGAQFVDTSWSSTTGNFSITNTGVTTGMSLNSSTITNTTFNLSASGEIIGNYVIADSTTSNIPIKSSGKSIEDNSGIKSSGSKQSYINGSWVGYDDSLNLSSSVSNKEISTISPSYLEYTILNTLGKTLMDTKVTSDGVYLSDTSNSIKYTSKGISANNSLAIESPAISSKGIYNNTSSASANLTIDDSGIIHRVSSSEKYKKNISPIDDIIDKGKALLTITPKKWQDKNNDKDTQVGLIAEDLEKVGLSEFLFYKDGKPEGIQYDRLFILLMPLIKNILEEQNG
Physico‐chemical
properties
protein length:1169 AA
molecular weight: 127031,62300 Da
isoelectric point:4,65713
aromaticity:0,08041
hydropathy:-0,36014

Domains

Domains [InterPro]
DC_0015
STR
1–565
DC_0015 DC_0203
IPR030392
CHP
1081–1169
IPR030392
IPR030392
CHP
1081–1131
IPR030392
YP_009843950.1
1 1169
Architecture
STR
RBD
STR 1-565 | RBD 1044-1169
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactobacillus phage 521B
[NCBI] 		2510942 Uroviricota > Caudoviricetes > Herelleviridae > Tybeckvirus tv521B >
Host Lactobacillus brevis
[NCBI] 		1580 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009843950.1 [NCBI]
Genbank nucleotide accession
NC_048752.1 [NCBI]
CDS location
range 88232 -> 91741
strand +
CDS
ATGGCTAAGCAAAAGGGGGATATCCGTAGACAAGCCTCTTTAGGAACAGAATTAAAAAGAAATATAAACAATAATAATTCAACTTCTGATCTAGTATTAGCTAGAGTTTCTAAGGTAGACTATGAGAATAATAGTATTGAATATATTGTACAAACAAATGGTATGAATAACAGCTCGGGAGCTATATCCAATGGAGGCGCCAGACTTCCTGTTTCCTTTGGTGGTAAAAATGGCTATGGAAATCCTTATGGATCAGTTAATACGATTAGGGTTAATGATATTGTCTTAATTGGCTTTGTTGGGGGTAAAAAGAATTCCCCTATTGTAATAAGCAAATATTTGTCTGACGAAGATGCCTATATGCTATCCGATTATTCAGGGGACCAATATATGGCTCCTAATGATGAAGATATGTATGATAAAACTAATTCATATAGAGATTTATATCCAGATTTAACTTACTCCTATCATAATGGTAATGGATATTATGAGCATACTTTTAGTGGGAATAGCTTCTTAGTAATGGATGATTATGATATTAAGGGTAATTTTGTAGACTATCCAGTAGGCGAGGTTGATGCTTCTACTTACTACTCATTACGGGGAAATAAATATAAAGATGGAACAAACTTTGACACTTTAAATTATCTAGCTCCAAACATATTTTTTAAACATCAAGGAAGCTATCTATTAGATGATAACGGAGAAGAAAAACTAGATCATCATCAAACAAATGTTTCTATATCACCCCAAGGAACGACTAGACTAACTACTTTTCATGATGATGATAAATGGCTATCGTTGTTTTCTATAGATGGGGATAATGGGGAAATAAGTCTTACTAGAGAAAATGATAACTCTATCAATATTGGGGATACTTCTGATAGTAATGCCACATTTACAATTGATAAAGACAATAATTTAATATTATCATCAGGTAATACAAAAATGACGCTTTCTGACGGTCATCATATTATTGCTAGCGACTTAGATACTGATTCAGATAAAATAGATCTTTATCAATCGGCTTTAAATAACAAGAATTCAATATCTGGTATAAACAATAGTATAAACTCTATTAATAATAATATGTCTTCTAGTTCCAGCTCATTATCTACTGTGAATGACCAAGTGAATATGTCAGCATCTTCTATTTCGCAAACGAATGCTATAGCTAGTTCAATTTACGGAAATGCGACTACTTCTGTAAATATGTTTTCTTTAGCAAGTTCTATTGCGAATACTGAAATAGATAGTAATACCGGATTTTATAAAGAAAATAATGGTAGCTTATCAACTCCTAAAATGGCGGCAATAAGAAATTTCACTTATATACTAACTGCCTACTCCGTTACTAGCCCTGTTACCATAAAAATAGCCTTTTATGACTTAAATAAGAACTTTATAAATGAGAAAGAAATTACAGGTAATACAGGAGATGTATCTATATCTTCTGTTTCACCAGATAATTCCGTATATATTTCTGCAAGTGTAAGTAGTAACGCCTTTAAAGTAAAATTAGAGCAAGCAGATAAGGTTACTAGTTGGTCTCCATCAATTGTCGATTTATATACAAATAATAATACGGTATTAGAACTATTAAGTGCGGCTAAAATAGCACAAGCAGATACTAATGCCAAAATGTCTACGGTAACTAGCAACAATTATTTAAATAGTCTATTACAGTATAATAATGATTCACAAATATTAGCCAGTGATAAAGATTCTTTAGCTAATTCTTGGGACTTATTCAAAGCAGATTATAAAGTAGTAGTATCCTATGCTACTAAATACTCAGTAGACTTAACAACTGCCAATAGCTACTATACCCCTTTGGAAAATTCTATTGAAAAAGATATTCTGGTTGATAGAACGTCTAATAGCCCAGCAGGAGCCTATACAATCAATATTAAGGGTCTTCAATCTGCACTTGATAAAGTTATACCTAATATAATTTCATCCGCCCTGAATAGTGTTATAACAGCTCAGAATACGCTTGCTACAAATACTAGCAGTTACAGAAATCTATTACTAGGAACCACTACAAATATTTCTGCAACTGGAGATCAGAAATTATACTCCTTATCAAACGGAGCTAGTCAAATATCTGGAAGTACTATACTATCTTTTACTTTTAATACTACTGATGTTAATAGCAATTTTTCTATTAATGAGGTTATTCTAAACAATGATGGATCTATTAATAAAGAAGTTGTTTTAATTGATAATCTTCCAAACAATATGACTAATAATGTTGTTTCTAGCTTTATACAGCCTATTGTGCCTACTTTAAATCAAAAGGCGGACATTTATATAAGGTTCTCTTCTTATAGGCAACCTGTTCAAATTTCTAATATGATTATGGCGACATCGAATACTACTAAAGTAACATGGGTTGCGGCTCCTGAAGATATATCTAATACTACTACAGACAAACTAGCTACCTTTAAAATTACAGATGACCAAATTACCAGTGCAGTATTTGACCACCTTCTAGAACAGTCCGATGTATTTACACAAACTGCTGAAAAGGCTCAAATTGCCGTCACCCAAGGAGATGTCTCGGCAGGATTATCAATTGAAGCCGGTAAGATGGTTTGGTTTGGTAAAGAAATAGATATTTTGGGAGACATTGTTGATAACAATAAAATAACAGGTGCTCAATTTGTAGATACTTCTTGGTCTTCTACTACTGGAAACTTTAGTATCACTAATACTGGAGTAACTACTGGCATGTCATTGAATAGTTCAACAATAACTAACACAACTTTTAACTTGTCGGCATCTGGGGAAATAATTGGTAATTATGTCATAGCAGATAGTACCACCTCTAATATTCCTATTAAGTCTTCTGGTAAGTCAATAGAAGATAACTCTGGTATTAAGTCTTCTGGTAGTAAGCAATCGTATATTAATGGATCATGGGTTGGATATGATGATAGTTTAAACTTATCAAGTTCAGTTAGCAACAAGGAAATATCTACTATTTCTCCTAGTTATTTAGAATATACAATACTAAATACATTAGGAAAAACTTTAATGGATACTAAGGTTACTAGTGATGGCGTATATTTAAGTGATACTAGCAACTCTATTAAATATACTAGTAAAGGGATATCTGCTAATAATTCGTTAGCTATAGAGTCTCCTGCTATTTCTAGCAAGGGAATATATAATAATACTTCTAGTGCTTCTGCAAACTTAACCATAGATGATTCTGGAATAATTCATAGAGTATCATCTTCTGAAAAGTATAAAAAGAATATTTCACCAATTGATGATATAATAGATAAAGGTAAAGCACTATTAACTATCACACCTAAGAAATGGCAAGATAAAAATAATGATAAAGATACCCAAGTAGGATTGATTGCCGAGGACTTAGAAAAAGTAGGATTATCTGAATTCTTATTTTATAAGGATGGTAAGCCCGAGGGTATTCAGTATGACCGATTATTTATTCTTCTAATGCCATTAATTAAGAATATTTTGGAGGAACAAAATGGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a280393837717742ed9624f121cbdcb7253553c60664fa126e70f0e476848f1a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5978
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation of virulent Lactobacillus brevis phages Feyereisen,M., Mahony,J., O'Sullivan,T. and van Sinderen,D. 2019-04-26 — GenBank