Protein

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Genbank accession
QQO91081.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 0,82
Protein sequence
MLRPKLNRVWTSNNANLRRDPGDAKYLQGWIAEIPTFQVLNYLQYKVDTTLLALAERGVFEWGTDVQYGLGSLVWDDATRTVYVATVGSPSRTLRPSQNLGQWAASAIQVSRYDYDDIVSKISAHIADVTSNPHRLTANMIGAYNKAQIDSLIAQYNALVASHANDRNNPHQVTAAQAGAVPIIGGTYTGPVTFQQGMLFDASGTTKLSFGPAGFYMQSGDTRIGLDASGAPVVGKVSTNTNSRIITDATFAEVKAREEPKYAVPEPNFCQHLIGDFNINYGKGAINASDNLYFNNAYGGALYRTAGQDVRETLFEGDGYGFTDCTICVDVLSNTPRAPDSDDNVGIYFSLNGVSGENIDFFLKNKGQLSVVRSSAAGSDWIYYTLPGQVNKWYRIVATLSTTTGLEIYVDGVRVAADTSQNVAAACVGRYPQIHFYPTSRNYAVRNFRVWDFKMTPNQISTL
Physico‐chemical
properties
protein length:463 AA
molecular weight: 50665,97910 Da
isoelectric point:6,09481
aromaticity:0,11015
hydropathy:-0,23693

Domains

Domains [InterPro]
DC_0782
STR
5–451
DC_0782
IPR013320
STR
315–463
IPR013320
G3DSA:2.60.120.200
STR
316–463
G3DSA:2.60.120.200
PF13385
LEC
341–461
PF13385
QQO91081.1
1 463
Architecture
STR
STR 5-463
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QQO91081.1
1 463
Domain Start End Length (AA) Confidence
N-terminal 1 228 228 0,8280
Central domain 229 427 200 0,5368
C-terminal 428 463 35 0,5640
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-228
Central
229-427
C-terminal
428-463

Taxonomy

  Name Taxonomy ID Lineage
Phage Yersinia phage PYps3T
[NCBI] 		2801357 Uroviricota > Caudoviricetes > Chaseviridae > Carltongylesvirus > Carltongylesvirus PYps3T
Host Yersinia pseudotuberculosis
[NCBI] 		633 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QQO91081.1 [NCBI]
Genbank nucleotide accession
MW147599.1 [NCBI]
CDS location
range 46987 -> 48378
strand +
CDS
ATGTTAAGACCAAAACTTAATAGAGTCTGGACTTCGAACAACGCCAACTTACGGCGTGACCCTGGGGATGCAAAATATCTTCAAGGGTGGATTGCAGAAATCCCAACCTTCCAGGTTCTTAACTATTTGCAGTATAAGGTTGACACTACTCTTCTGGCATTAGCTGAACGTGGTGTCTTCGAATGGGGAACCGATGTTCAGTACGGACTTGGTTCCCTTGTGTGGGATGATGCAACCCGAACTGTTTATGTTGCAACTGTTGGTTCTCCTAGTCGTACTCTGCGCCCTAGCCAGAACTTAGGGCAGTGGGCTGCAAGTGCGATTCAAGTATCTCGTTATGACTACGACGATATTGTTAGTAAGATTTCTGCACACATTGCAGATGTTACTTCTAACCCACACAGACTAACAGCCAACATGATTGGTGCATACAACAAAGCACAAATCGATTCGTTGATTGCTCAATATAATGCCCTTGTTGCAAGTCATGCCAACGACCGAAACAATCCCCATCAAGTAACTGCTGCTCAGGCAGGTGCTGTACCTATCATTGGCGGCACTTATACCGGACCTGTTACGTTCCAGCAAGGGATGTTGTTTGATGCAAGTGGAACAACCAAGTTGTCATTTGGTCCTGCTGGCTTCTATATGCAGTCTGGTGATACACGTATTGGTCTGGATGCCAGTGGTGCTCCAGTTGTTGGAAAGGTTTCAACAAACACCAACTCTCGAATCATTACTGATGCAACATTTGCAGAAGTTAAGGCTCGTGAAGAACCAAAGTATGCTGTACCAGAACCAAACTTCTGCCAGCATTTGATTGGTGACTTCAACATTAACTATGGAAAGGGTGCAATTAACGCCTCCGACAATTTGTATTTTAACAATGCTTATGGTGGTGCTCTGTACAGAACTGCTGGCCAGGATGTTCGAGAAACTTTGTTCGAAGGTGATGGATATGGGTTTACTGATTGCACAATCTGTGTTGATGTTCTTTCTAACACACCTCGTGCACCAGATAGCGACGACAATGTTGGCATCTACTTCTCGCTTAATGGTGTTAGTGGCGAGAACATAGACTTCTTTTTGAAGAACAAAGGACAACTCAGTGTTGTCCGAAGCTCTGCTGCTGGTTCTGACTGGATTTACTACACCCTTCCTGGGCAGGTGAATAAGTGGTATCGCATAGTTGCAACACTAAGTACGACTACTGGCCTTGAAATCTATGTTGATGGCGTGCGTGTGGCAGCGGATACATCACAGAACGTTGCTGCTGCATGTGTTGGCAGGTATCCTCAGATTCACTTCTACCCAACATCAAGAAACTATGCTGTTCGCAACTTCCGAGTTTGGGATTTCAAGATGACTCCAAACCAAATATCCACTTTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
672c325c5148da80a0d6a290d886614f043b7203510b5fb0e36c546ad24517c9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7699
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome of Yersinia pseudotuberculosis phages Hammerl,J.A. and Hertwig,S. 2018-05-10 — GenBank