Protein

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Genbank accession
YP_009362955.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,87
Protein sequence
MSLPYKVRFKLPLEFLTLQDWNNFVQNLLFINQYGPGKLLQYYQNGNFQNLNDVIAKYLYVSALKAKGYNVLHNLSQPQAYTFGEGKQQPFKSMTNKPTVSFPYSIPFEFIQFYPISELPNYKFPVFPVEKLKVQLSQVSKQLQLLIPKLISKIVTPRFIAGTQFTFSGTATVEDLVNNYLNPTYLQSWREITIQNLGNSAVQINNSIYLMPKNCLKITASSPSEIQLTAQTPTLLSEEIEFVEISITTYTITITNSQSDPTPSPFQQLLQLDLSSILSSPSQLLNLQFCLDAQCQTPLYAWIEQNSLSNAYIWIKLPVSIPANSSITIYMFVRNSIQYPYTGIAPQLTSTYAQYDNGENVFNFYDNFAGTTLSSKWTAGTSGGSYTVNNGLTITLPYNAPSGSYVYISTSSFTVNSPQIVESYANLNGFNTADFRMVPIALTQYNNVPWEADLGKNENAVGWVGDAQATNTVSAETTTVGNVNFFESSQITSTSEYQLWGIVYPNNGSVTVQYNYQNWGSTTTYVPSTPLYITISNYVYPAQDTYTTTYPINVYYVRARAYPPNGVMPSNSQPQKTIILV
Physico‐chemical
properties
protein length:581 AA
molecular weight: 65233,76360 Da
isoelectric point:5,29088
aromaticity:0,13597
hydropathy:-0,16592

Domains

Domains [InterPro]
IPR018765
STR
291–378
IPR018765
YP_009362955.1
1 581
Architecture
STR
STR 291-378 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Sulfolobus islandicus rod-shaped virus 4
[NCBI] 		1983547 Viruses > Adnaviria > Zilligvirae > Taleaviricota > Tokiviricetes
Host Sulfolobus islandicus
[NCBI] 		43080 cellular organisms > Archaea > Thermoproteati > Thermoproteota > Thermoprotei > Sulfolobales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009362955.1 [NCBI]
Genbank nucleotide accession
NC_034628 [NCBI]
CDS location
range 20139 -> 21884
strand +
CDS
ATGAGCTTACCTTACAAAGTACGTTTTAAATTGCCATTAGAATTTCTGACTTTGCAAGACTGGAATAACTTTGTGCAAAATTTGTTATTTATAAATCAATACGGTCCAGGTAAACTTTTACAATATTATCAAAATGGCAATTTTCAAAATCTTAATGATGTAATTGCTAAATATTTATATGTTTCAGCGTTAAAAGCTAAAGGTTATAATGTTCTTCATAATTTATCACAACCTCAAGCTTATACATTCGGAGAAGGAAAACAACAGCCATTTAAAAGCATGACAAATAAACCTACTGTAAGCTTTCCATATTCAATTCCATTTGAATTTATACAATTTTATCCGATATCTGAATTGCCTAACTATAAATTTCCAGTTTTTCCAGTTGAGAAATTAAAAGTTCAATTATCACAAGTTAGTAAACAATTACAATTATTAATTCCCAAACTCATAAGTAAAATTGTAACTCCTAGATTCATTGCTGGTACGCAATTTACATTTTCTGGAACAGCGACTGTTGAAGATTTAGTGAATAATTATTTAAATCCTACATATTTACAATCTTGGAGAGAGATAACAATACAAAATTTAGGAAATTCTGCAGTTCAAATTAATAATTCTATCTATTTAATGCCTAAAAATTGTTTAAAAATAACTGCAAGTTCTCCATCTGAAATTCAATTAACTGCACAAACCCCGACTTTGCTAAGTGAAGAAATTGAATTTGTTGAAATTTCCATAACTACTTATACAATTACAATAACAAATAGTCAATCAGACCCGACTCCTTCACCATTTCAACAATTATTACAACTAGATTTGTCTTCAATTTTATCTAGTCCATCCCAACTTCTTAATTTACAATTTTGCTTAGATGCACAATGTCAAACTCCATTATACGCATGGATCGAACAAAATAGCCTATCTAATGCTTACATTTGGATAAAATTACCAGTTTCAATTCCTGCAAATTCATCAATTACAATTTATATGTTTGTAAGAAATTCGATTCAATATCCTTATACGGGGATAGCTCCGCAACTTACTTCCACATATGCTCAATATGATAATGGAGAAAATGTATTCAATTTTTATGACAATTTTGCTGGAACTACATTAAGTTCAAAATGGACAGCCGGTACGTCTGGCGGTTCATATACAGTTAATAACGGGCTAACAATAACACTTCCATATAATGCTCCGTCAGGAAGTTATGTTTATATTTCAACTTCTTCTTTTACTGTAAATTCTCCACAAATAGTTGAAAGTTATGCAAATTTAAATGGTTTTAATACTGCTGATTTTAGGATGGTTCCTATTGCATTAACGCAATATAATAATGTCCCATGGGAAGCTGATCTTGGAAAAAATGAGAATGCTGTTGGATGGGTAGGAGATGCTCAAGCAACAAATACAGTTAGTGCGGAAACTACTACTGTAGGTAATGTAAATTTTTTTGAAAGTTCGCAAATTACAAGTACATCAGAATATCAATTATGGGGAATAGTATATCCTAATAATGGAAGTGTAACTGTTCAATATAATTATCAAAATTGGGGTTCTACTACTACTTATGTTCCTTCTACTCCATTATACATAACAATAAGTAACTATGTTTATCCAGCTCAAGATACTTATACAACAACATATCCTATTAATGTATATTATGTTAGAGCACGAGCTTATCCTCCAAACGGAGTAATGCCTTCAAATTCTCAACCACAAAAGACAATAATTCTAGTCTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
5ea91ffe039dfe5d7962b32f24d06084ae6b3e8030d387f08a66349d26b46a07
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6518
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Differentiation and structure in Sulfolobus islandicus rod-shaped virus populations Bautista,M.A., Black,J.A., Youngblut,N.D. and Whitaker,R.J. 2017 — GenBank