Protein

View in Explore
UniProt accession
A0A1B1PDV2 [UniProt]
Protein name
Tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MNHVPDGVPVRVFIDEIGEDNDVTEDFEALKENATFHIVESAGGGAIKGVMKIFSVILKPLAKLLSPSVKGASPNLANSQADSPNNSLTDRNNKARPYERSYDICGTVQTIPNNLMSTYKVFNAAGKIVEYGYYDAGRGYLDIPPEGITDGDTRVSDITGTSVAVYAPYTSPNNTSTPQVMVGDPIEQGLYITVESNEVDGVVLKAPNGLGISFSYMSGYPSLSGNIGTIYDPTGGSDFSGVLVPNDTFSLVSAWTNTDVDLSGGGYQVLSVSEGTVTFIVPGGLIGRWQEIRPGSFFRGDGEASLQPDNTYEKTLTDWVSINRTEVERIVANIAAANGMYKDNGKSKTLASVTAEIQYQLLDENSTPYGPIYTAQGTVSGRTPDYNGVTIYADLPVVSRVRVRARRVTDLDFNFEGSVVDEITYVNLYGQTRDNTPHYGNRTTVHSMRKQTPRAAEVKQPQLRMIATEMVHKYLGNGVFEDTMTPNTQAVQSLIRLARDPDVGGLNLTVRNMDKLLAVQNEVEAYFGDKQAGEFCYTFDDYKTTMQDIVSTIADAIFCTPYRRGADILLDFERPRMGPEMVFTHRSKAGTSEKWTRTFNDSQVFDSLKFSYIDPKTNVKETITIPETGGVKTETYDSKGIRNYKQAFWAANRRHQKNILKKISVSFTATEEGIFALPNRAISVVKGSRMATYDGYVTAVNGFTVELSQPVKFTSGDDHSLILKLRDGGVQSVNVVPGAHDRQVIMTSVPQEAIYTGNSALKTEFSFGNEARHNAQMILVSTVDPGDDRTVKITGFNYDKDFYKFDNVPPFGRAFSSGFDNGFN
Physico‐chemical
properties
protein length:824 AA
molecular weight: 90453,02220 Da
isoelectric point:5,17663
aromaticity:0,09587
hydropathy:-0,36032

Domains

Domains [InterPro]
DC_0118
STR
1–658
DC_0118 DC_0808
NF040662
Unmapped
324–804
NF040662
A0A1B1PDV2
1 824
Architecture
STR
RBD
STR 1-658 | RBD 675-818 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A1B1PDV2
1 824
Domain Start End Length (AA) Confidence
N-terminal 1 202 202 0,9784
Central domain 203 401 200 0,6506
C-terminal 402 824 422 0,1384
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-202
Central
203-401
C-terminal
402-824

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage BPS11Q3
[NCBI] 		1857099 Uroviricota > Caudoviricetes > Sarkviridae > Jerseyvirus > Jerseyvirus BPS11Q3
Host Salmonella enteritidis
[NCBI] 		149539 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ANT42337.1 [NCBI]
Genbank nucleotide accession
KX405002 [NCBI]
CDS location
range 29631 -> 32105
strand -
CDS
GTGAACCATGTTCCGGACGGGGTTCCGGTACGTGTTTTCATTGACGAAATCGGAGAAGATAACGACGTAACAGAAGACTTCGAAGCACTGAAAGAAAACGCGACTTTCCACATTGTGGAATCAGCTGGTGGTGGCGCCATTAAAGGCGTCATGAAGATTTTTAGCGTTATCCTTAAACCGCTGGCGAAACTATTATCGCCGTCCGTGAAAGGTGCGTCCCCGAACCTTGCGAACTCGCAGGCGGATTCCCCAAACAACAGTCTCACTGACCGTAACAACAAGGCGCGCCCGTACGAACGCAGCTACGACATCTGCGGAACGGTGCAAACTATCCCAAATAACCTTATGTCTACGTATAAGGTGTTTAACGCCGCTGGTAAAATTGTAGAGTACGGCTATTACGACGCCGGGCGTGGATACCTCGACATACCCCCGGAAGGTATAACGGACGGGGATACCCGTGTATCGGATATAACAGGTACGTCGGTTGCCGTGTACGCACCATATACATCGCCCAATAACACATCTACACCGCAGGTCATGGTTGGGGACCCCATAGAGCAAGGCCTATACATTACCGTAGAATCTAACGAAGTTGACGGCGTGGTTCTTAAAGCACCGAACGGTCTGGGCATTTCTTTCTCTTACATGTCCGGGTATCCGTCTTTGTCTGGAAACATTGGCACGATATATGACCCAACAGGTGGTTCGGATTTTTCTGGGGTGTTGGTGCCTAATGATACATTTTCGCTGGTGTCAGCGTGGACAAATACGGACGTCGACCTATCCGGCGGCGGGTATCAGGTGTTAAGCGTATCCGAAGGGACCGTTACCTTTATAGTGCCCGGTGGCCTCATTGGTAGGTGGCAAGAAATAAGACCCGGTTCATTTTTTCGAGGTGACGGAGAGGCGTCGCTGCAACCGGATAACACATACGAGAAAACCTTAACCGATTGGGTGTCAATAAACCGTACCGAGGTTGAGCGCATAGTTGCCAATATCGCCGCCGCCAATGGTATGTATAAAGACAACGGCAAATCTAAAACACTAGCGTCGGTTACCGCGGAGATACAGTACCAGCTGCTTGATGAAAATAGCACCCCTTATGGGCCGATATACACTGCACAAGGAACCGTGTCCGGGCGAACCCCAGACTACAACGGTGTCACTATTTACGCCGACCTGCCGGTTGTGTCGCGGGTGCGGGTGCGCGCCAGAAGGGTGACAGACCTCGACTTTAATTTCGAAGGCTCAGTGGTAGACGAAATAACCTACGTTAACTTGTACGGGCAAACACGCGATAACACTCCACACTACGGCAACAGGACTACCGTACACTCAATGCGCAAGCAGACACCACGCGCCGCGGAAGTTAAGCAACCACAGTTACGTATGATTGCCACCGAAATGGTACACAAATACCTTGGTAACGGTGTTTTCGAAGATACGATGACCCCCAATACCCAGGCCGTGCAATCTCTTATCCGCCTGGCGCGTGATCCGGATGTGGGGGGTTTAAACCTGACGGTACGCAACATGGATAAGTTACTTGCCGTGCAGAACGAGGTCGAAGCGTATTTCGGTGACAAACAGGCGGGGGAATTTTGCTACACGTTTGATGACTATAAAACCACCATGCAGGACATAGTTAGTACTATAGCAGACGCCATATTCTGCACCCCATATCGGCGTGGGGCGGATATCCTTCTCGATTTTGAGCGCCCCCGCATGGGTCCTGAGATGGTGTTCACCCACCGAAGCAAGGCCGGTACTTCTGAAAAGTGGACCAGAACATTTAACGATTCTCAGGTGTTCGATAGTCTTAAATTCTCGTACATAGACCCAAAAACAAACGTTAAAGAAACAATAACAATACCTGAAACTGGCGGGGTTAAAACGGAGACCTACGATTCAAAAGGTATTCGCAACTATAAGCAGGCTTTCTGGGCAGCAAACCGTCGTCATCAGAAAAACATTTTAAAGAAAATTTCAGTGTCGTTTACCGCCACGGAAGAGGGTATCTTTGCTTTACCAAATCGTGCCATTAGTGTGGTTAAGGGTTCACGTATGGCGACCTACGACGGCTACGTAACCGCGGTAAACGGGTTCACCGTAGAACTGTCACAACCAGTTAAGTTCACCTCGGGAGATGACCATTCTTTGATTCTCAAGTTACGTGACGGCGGCGTGCAAAGTGTTAATGTAGTCCCTGGAGCGCACGACCGGCAGGTAATCATGACGTCAGTACCGCAAGAAGCCATTTACACAGGTAATAGTGCTTTGAAAACTGAATTTTCATTCGGCAACGAAGCAAGGCATAATGCTCAGATGATTCTTGTTTCTACGGTAGACCCTGGCGATGACAGAACAGTCAAAATAACCGGGTTTAACTATGACAAGGATTTCTATAAGTTTGACAACGTGCCTCCTTTCGGTCGTGCGTTCTCCAGCGGATTCGATAACGGTTTTAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
93213e7b42b383fa407602bd964c4fcd206eb26f06c878d822cc77d4feb4c18a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8293
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50