Protein

View in Explore
Genbank accession
YP_010673459.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,88
Protein sequence
MIVYNNQAPDAVNNVGQFGATEGSIGAYKQAAEYASDAKYWALLAESKFGTIDDLVAEVERLYQQGILMKQDIEDLKKDFIDQDARLMTLIAQTNAAVSDANNAVAIINQKLIEVQNQLDILLGMSVDVTTLPPGTPATGSFNPTTGVISLGIPEGDPGKDGTVKDLDTAPTGVPELEDLGFYVDKDDNTVHKTTLENIANLIPSVRSISVNGGPVLDGEVALTINKDTVDLGNVLNVAQYSRQEIDDKFDKTTKTYQSKAEADADAQYRQVGEKVLVWEATKYEFYTVAANKTLTPVKTEGRILTVNSRSPDSSGNIDITIPTGNPSLYLGEMVMFPYDPTKNISYPGVLPADGRLVSKESALDLGPSLISGQLPVVSETEWQAGARQYFSWGKLADGVTDADSTNFINIRLPDWTGGEAIRAPDSDKDTQYKGSVQAQKPYVVTVNNQAPDEITGNVHLSRSILGAASSGANSDITSLSGLTTPLSISQGGTGAKDADGARSNFGLGSAALKDTGVSGDAVPLLNADNTWSGVQTLSTPLAVASGGTGVTSLAELFTALNIFGRVVDVKRLIASGTWTPSATAKSAFVFLQAGGGAGGGSTTPPASNASAGSGGNSGSAALLYLPTLAASYSCLVGSGGLGVAGQPGGNGGDTSLGSICSVVGGAGGNRLTSSSISNIGPTSQSDDYTQAALFRTGPSFGTAAAVFNATTTSAGHGASSSLGGGGRSANAVPGVDGSGFGSGGGGTACSTGVTQQPGGNGAGGCVLIIELS
Physico‐chemical
properties
protein length:773 AA
molecular weight: 78891,36800 Da
isoelectric point:4,47098
aromaticity:0,05951
hydropathy:-0,11902

Domains

Domains [InterPro]
DC_0608
ATT
51–640
DC_0608
IPR049304
STR
578–769
IPR049304
YP_010673459.1
1 773
Architecture
ATT
STR
ATT 51-640 | STR 641-769 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage O18-011
[NCBI] 		2742113 Uroviricota > Caudoviricetes > Mktvariviridae > Kuravirus > Kuravirus O18011
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010673459.1 [NCBI]
Genbank nucleotide accession
NC_070985.1 [NCBI]
CDS location
range 31000 -> 33321
strand -
CDS
ATGATCGTTTATAATAACCAAGCACCGGATGCAGTGAATAACGTTGGGCAGTTTGGTGCTACTGAAGGCTCTATAGGAGCTTACAAGCAAGCAGCAGAATATGCATCTGATGCTAAATATTGGGCATTACTGGCTGAGTCTAAGTTTGGTACAATCGATGATCTGGTCGCTGAAGTAGAACGCCTATACCAACAGGGTATTCTAATGAAGCAGGATATTGAAGATCTTAAGAAGGATTTTATAGATCAAGATGCTCGTTTGATGACTCTAATTGCTCAAACTAACGCAGCGGTCTCTGATGCTAACAATGCTGTTGCTATCATTAATCAGAAACTTATTGAAGTTCAGAATCAGCTTGATATTCTGTTAGGAATGTCCGTTGATGTAACTACACTTCCTCCGGGAACTCCGGCTACTGGTTCTTTTAATCCGACCACTGGTGTAATCTCTTTAGGTATTCCAGAAGGTGATCCCGGAAAGGATGGTACTGTTAAGGATTTGGACACAGCACCTACCGGTGTTCCAGAGTTAGAAGATTTAGGTTTCTATGTTGACAAAGATGACAATACCGTCCACAAAACCACTCTAGAGAATATTGCTAATTTAATTCCATCTGTTCGTTCTATCTCTGTTAACGGCGGTCCAGTTCTTGATGGAGAAGTTGCCTTAACAATCAACAAGGATACAGTTGATTTAGGGAATGTTCTGAACGTTGCTCAGTATAGTCGTCAAGAGATTGATGATAAGTTTGACAAAACTACCAAGACATATCAATCAAAAGCAGAAGCTGATGCTGATGCTCAATATCGTCAAGTTGGAGAGAAAGTCTTAGTTTGGGAAGCTACTAAGTATGAATTCTATACTGTTGCTGCTAACAAAACACTAACTCCTGTTAAAACTGAAGGTAGAATCCTTACCGTTAACTCTCGTTCTCCAGACTCTAGTGGTAACATTGACATTACCATTCCAACAGGAAACCCTTCTCTATATCTTGGTGAGATGGTGATGTTCCCTTATGACCCAACTAAGAATATCTCCTATCCAGGAGTTCTTCCTGCTGATGGTCGTTTGGTATCAAAGGAGTCTGCTCTTGATTTAGGCCCATCTCTCATCAGTGGTCAGCTTCCTGTGGTCTCTGAAACAGAATGGCAGGCTGGTGCTAGACAATACTTCTCTTGGGGTAAATTGGCAGATGGAGTTACTGATGCAGATTCTACTAACTTCATTAACATTCGACTCCCAGATTGGACTGGAGGGGAGGCAATAAGAGCACCAGATTCTGATAAGGATACTCAGTATAAAGGGTCTGTACAAGCCCAGAAACCTTATGTTGTCACGGTAAATAACCAAGCACCTGATGAGATTACAGGGAACGTACACCTCTCCAGATCTATCTTAGGCGCTGCCTCTTCTGGTGCGAATTCTGACATCACATCTTTATCTGGACTCACAACACCATTATCCATCTCTCAAGGAGGTACTGGAGCTAAAGATGCTGATGGTGCTCGTTCTAACTTCGGTCTAGGGTCTGCAGCACTAAAAGACACTGGGGTATCAGGAGATGCCGTACCGCTCCTTAATGCAGACAATACTTGGTCCGGTGTACAGACACTGAGCACTCCATTGGCTGTTGCTAGTGGTGGAACTGGTGTTACATCTTTAGCGGAACTATTTACTGCATTAAACATATTTGGTCGTGTAGTAGATGTTAAGCGTCTGATAGCTTCTGGTACATGGACACCCTCTGCTACAGCAAAGTCTGCGTTTGTTTTTCTGCAAGCTGGTGGTGGGGCAGGTGGTGGTTCAACAACTCCACCTGCCAGTAACGCCAGCGCTGGTAGCGGGGGTAACTCTGGTAGTGCCGCTTTATTATATCTGCCTACCTTAGCGGCCTCCTACAGTTGCCTTGTGGGTTCTGGTGGACTAGGGGTAGCGGGTCAGCCCGGTGGTAATGGAGGGGATACTTCCCTCGGTTCCATCTGCTCGGTAGTTGGCGGGGCTGGGGGTAATCGTCTTACTTCCTCCAGCATTTCCAACATTGGCCCTACAAGCCAGTCTGATGACTATACTCAGGCTGCGTTATTTCGCACTGGACCCAGCTTTGGTACAGCCGCTGCCGTATTTAATGCTACCACCACGTCAGCCGGTCATGGTGCGAGTAGCTCTCTAGGTGGCGGTGGACGCTCAGCCAACGCGGTTCCCGGAGTGGATGGTTCTGGTTTTGGTAGTGGTGGTGGTGGTACCGCGTGTTCCACTGGTGTTACTCAGCAGCCGGGAGGTAACGGTGCTGGTGGGTGCGTACTTATTATTGAATTATCATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
f4dac98d2aec103a6aa0ed423493a6f7815dfa627165703fd0922bd872aa7339
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7092
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic and proteomic analysis of O18-011, a novel Escherichia coli phage Shahin,K., Bao,H., Soleimani-Delfan,A. and Wang,R. 2020-05-06 — GenBank