Protein

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Genbank accession
YP_009056200.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MNEMFSQGGKGSTGILTNKQAVARHFGVKQSDVVYFSVGALLTGYKVIYDKASQRAYSLPADIGPGVTAVSLSPAGVLVHSAGSVDLGALAVTREEYVTLPGSFTTGVTVNTKNELVVFTDGKYRWDGTLPKEVLANSTPKTTGDIGLGAWLSVGVDALRSDLNKPNGLSYIGTASSVSELSSLSGSIGDSIILDSYVSGFNLGGGIMVAVSEDTTIDNIVTFLGSGVVWKRKFFNGTVDVYDAGYTGTGDIAPFINKVNSAGYDCLVPTSGTISAPIVLDVAKGSLVGANKCTLTEVEGLTGEYYLIVTNSNTDYTARDAINATALLTGISFVGKGARKMCLGGSTSGEVAELRIANCGFISTAGIEFKDNAYRVLFDKCIISRSFTNSVIFNSPANAGEVIKFNHCWMVDNGGPFTFENGQFIFDSCSLPAGKKAGYFDPVMALGDNATLVFANGNIEYQPGQSFVGFTVNGSSRLSIKDSTLLLPEGYSTVPIVSNGDGVVSFNNCSLPLYGNTTVGTGFPTRQLVGGSSKKITSRGCFPRAGFITTNWNLGSIVSPYINSISNGSGQFNNISNWTLSQTGTGIVTATVGNDVPNDLMFSTSFVLSVPSVDAAANFTQTIIDCEPGRYFQFGFWSKSTTTTLVSLRFLDQLGNAVADSIGYIIPVGNTFNFYALVDCVPQGAYKAEINFNVSSVVGGVVIHNTIYGLI
Physico‐chemical
properties
protein length:711 AA
molecular weight: 74765,38890 Da
isoelectric point:5,09172
aromaticity:0,10127
hydropathy:0,16709

Domains

Domains [InterPro]
G3DSA:3.30.2020.50
ATT
1–96
G3DSA:3.30.2020.50 G3DSA:2.10.10.80 DC_0715
DC_0018
ATT
1–260
DC_0018
IPR040775
RBD
91–155
IPR040775
YP_009056200.1
1 711
Architecture
ATT
STR
ATT 1-260 | STR 261-662 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009056200.1
1 711
Domain Start End Length (AA) Confidence
N-terminal 1 252 252 0,9969
Central domain 253 560 309 0,9932
C-terminal 561 711 150 0,9923
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-252
Central
253-560
C-terminal
561-711

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoP_PhAPEC7
[NCBI] 		1391223 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009056200.1 [NCBI]
Genbank nucleotide accession
NC_024790 [NCBI]
CDS location
range 60838 -> 62973
strand -
CDS
ATGAACGAAATGTTCTCACAAGGTGGTAAAGGTTCAACCGGAATCTTAACCAATAAACAAGCAGTAGCCCGTCACTTTGGGGTTAAGCAATCAGATGTTGTTTACTTCTCAGTGGGTGCTCTACTTACTGGTTACAAAGTCATCTATGACAAAGCGTCACAACGTGCTTATTCCTTACCTGCTGACATTGGTCCAGGGGTTACTGCTGTAAGCCTTAGTCCTGCTGGGGTATTAGTTCACTCTGCTGGTAGTGTAGACTTAGGTGCACTTGCTGTTACGCGAGAAGAGTATGTAACCTTACCTGGTTCATTTACTACTGGTGTAACTGTTAATACTAAGAATGAACTGGTTGTCTTTACGGATGGTAAATACCGTTGGGATGGTACGCTACCTAAAGAAGTTCTTGCTAACTCGACTCCTAAAACCACTGGTGACATTGGTTTAGGTGCATGGTTAAGTGTTGGTGTTGACGCTCTTAGGAGTGATTTAAATAAACCAAATGGCTTATCTTATATAGGAACTGCATCATCGGTTTCTGAGTTATCATCATTATCAGGATCAATCGGCGATTCCATAATCCTTGATTCGTATGTGAGCGGGTTTAATCTTGGTGGTGGTATTATGGTAGCTGTTAGTGAGGATACCACTATAGACAATATTGTTACCTTCTTAGGAAGTGGGGTGGTATGGAAAAGGAAATTCTTCAACGGCACCGTGGACGTGTATGATGCTGGGTATACCGGTACGGGGGATATTGCTCCGTTCATTAACAAGGTAAACTCTGCCGGTTACGACTGTCTTGTACCTACCTCAGGGACCATTAGTGCACCTATCGTACTGGATGTGGCTAAGGGATCTTTAGTAGGAGCTAATAAGTGTACCCTTACGGAAGTGGAAGGTTTAACAGGGGAGTATTACTTAATCGTAACCAACTCTAATACAGATTACACAGCCCGTGATGCCATTAATGCTACCGCCTTATTAACAGGAATCTCCTTTGTAGGTAAAGGTGCTCGAAAGATGTGTTTGGGTGGTAGCACCTCAGGGGAGGTAGCAGAATTACGTATAGCTAACTGCGGGTTTATATCTACTGCGGGTATTGAGTTTAAAGATAATGCATATCGTGTCCTGTTTGATAAGTGCATCATTTCTCGTAGTTTTACTAACTCTGTAATCTTTAATTCCCCGGCTAATGCAGGTGAGGTTATAAAGTTCAACCACTGCTGGATGGTTGATAATGGAGGTCCATTTACCTTTGAGAATGGGCAGTTCATCTTTGATTCATGCTCATTGCCAGCAGGTAAAAAGGCAGGCTACTTCGACCCGGTAATGGCATTGGGTGATAATGCTACCTTGGTGTTTGCTAACGGTAATATTGAGTATCAACCTGGGCAGAGTTTTGTAGGCTTTACTGTGAATGGAAGCTCCCGACTCAGTATTAAAGATTCTACGCTTCTGCTTCCGGAAGGCTACAGTACAGTGCCTATTGTTAGTAACGGTGACGGGGTAGTTAGTTTTAATAACTGCTCACTTCCACTGTATGGTAACACTACTGTAGGTACTGGATTTCCAACCCGTCAGTTAGTAGGTGGCTCTAGTAAGAAGATTACATCACGTGGGTGCTTCCCCCGTGCAGGATTCATCACAACTAACTGGAATCTAGGAAGCATTGTAAGCCCCTATATTAATAGTATTAGTAATGGGTCTGGGCAGTTTAATAACATATCTAACTGGACACTCTCGCAAACCGGAACCGGCATTGTCACTGCTACTGTAGGAAACGATGTCCCTAATGATTTAATGTTTTCAACTTCTTTTGTTTTATCTGTGCCATCGGTTGACGCAGCAGCTAACTTCACCCAAACAATTATTGACTGTGAACCTGGGCGTTACTTTCAATTTGGTTTTTGGTCTAAGAGTACAACAACCACCCTGGTGTCATTGAGATTCTTGGACCAGCTGGGGAATGCTGTAGCAGATTCCATAGGGTACATCATCCCAGTAGGGAACACGTTCAACTTTTATGCTTTGGTGGATTGCGTTCCGCAAGGAGCTTACAAAGCTGAAATTAATTTCAACGTTTCCTCTGTTGTTGGTGGCGTCGTAATACACAATACCATTTACGGATTGATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
939ac3a5631fe5b7fd52b9fc29c6edbb061a3bed2c4ec07450cea4d149960a35
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8057
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50