Protein

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Genbank accession
YP_010105149.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MSSFPPIGGIGGAGSLNVPDDHRFATTAARDAAIPDPKQGEQCTVQSGVPQYHLLQEYRVDKWVDITYIIEGPKGEQGKEGPQGPAGGKLPHKDLDVALYGDMNAPEWIAEGNFVYAFINPKFSELSNSPANDYDYGNDPDRTFPIVHGEQTVNTHDGKTYVTRTFIINEADRPKAYNREGYVEDNTFYNCPWQPIDGLIVSKKLTDGSFQKVPSGFMKFGGGLKPVFDGETTTVNAVAPFSEVVEIFDNSEVSSPEDNKTYVYSTVDLKADHEFWLNLDPTDVVEGYTISVATAPTSMSSITLFMGKSKVLKAPILPGSTIVIKRLTGENQFRIFKSAGGVFLGLDALFLDLDPANWQDHPINTYFVSEGTFANVNSDVNGKTGKLLAQVINTDVQNNPNSMIVHIYTIISGEDSINGLQFKRVADTKENFINAPLVPLNTTSGGDGFVDHGAIDNLTADYKTLADAKLCIGKGLSGSGNLRGQINDFIGGTTFLGETTINNMFNATRDDLVVMPQVEFHASIGEDTHPTVSCTGGLDGAVVGGTSDDFKPVDPS
Physico‐chemical
properties
protein length:556 AA
molecular weight: 60083,20260 Da
isoelectric point:4,61569
aromaticity:0,09353
hydropathy:-0,29766

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010105149.1
1 556
Domain Start End Length (AA) Confidence
N-terminal 1 421 421 0,6952
Central domain 422 545 125 0,0127
C-terminal 546 556 10 0,9748
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-421
Central
422-545
C-terminal
546-556

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage phi50-12
[NCBI] 		2654972 Uroviricota > Caudoviricetes > Schitoviridae > Penintadodekavirus 5012 >
Host Vibrio owensii
[NCBI] 		696485 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010105149.1 [NCBI]
Genbank nucleotide accession
NC_055824 [NCBI]
CDS location
range 52405 -> 54075
strand +
CDS
ATGAGTTCATTTCCCCCTATAGGTGGTATTGGTGGAGCAGGTTCACTCAATGTGCCTGATGACCACCGCTTTGCTACTACTGCTGCACGTGATGCAGCAATTCCTGACCCTAAACAGGGTGAGCAGTGTACTGTTCAATCAGGTGTACCTCAGTACCATTTGCTACAAGAATACCGTGTGGATAAGTGGGTAGACATTACTTACATCATCGAAGGTCCAAAGGGTGAACAAGGTAAGGAAGGTCCACAAGGTCCAGCAGGTGGTAAGCTTCCACATAAGGACTTAGACGTTGCATTGTATGGTGATATGAATGCACCTGAGTGGATTGCTGAAGGTAATTTTGTTTATGCCTTTATTAATCCAAAGTTTTCTGAATTATCTAATTCCCCTGCAAATGACTATGACTATGGTAATGACCCAGATAGGACATTCCCTATTGTTCATGGTGAACAAACGGTAAACACCCACGATGGTAAAACGTATGTCACTCGTACATTTATCATTAACGAAGCAGACAGACCAAAAGCTTATAACCGTGAAGGTTATGTTGAGGACAACACTTTCTACAATTGTCCTTGGCAACCTATTGATGGCTTGATTGTTAGTAAAAAACTAACCGATGGTTCATTCCAAAAAGTACCATCTGGTTTTATGAAATTTGGTGGCGGTCTTAAACCTGTATTTGATGGTGAGACTACAACTGTAAATGCTGTGGCTCCATTCAGTGAAGTTGTTGAGATTTTTGATAACTCAGAAGTGAGTAGTCCAGAAGACAACAAGACATACGTTTACTCAACAGTAGACTTAAAAGCTGACCATGAGTTCTGGTTAAACTTGGACCCTACAGATGTAGTTGAAGGTTACACTATTAGTGTTGCTACAGCTCCAACTTCAATGAGTTCAATCACTCTTTTCATGGGTAAATCAAAAGTACTAAAAGCTCCAATCTTACCGGGCAGTACTATTGTTATTAAACGCCTTACTGGAGAAAACCAATTCAGAATTTTCAAATCTGCTGGTGGTGTTTTCCTTGGTTTAGATGCATTGTTTTTAGACCTTGACCCTGCTAATTGGCAAGACCATCCAATCAATACTTACTTTGTAAGTGAAGGTACTTTTGCCAATGTCAATTCTGATGTAAATGGTAAGACAGGTAAGTTACTTGCACAGGTAATTAATACTGATGTGCAAAACAACCCTAACTCAATGATTGTTCATATCTACACAATCATATCTGGTGAAGACTCCATTAATGGTTTGCAGTTTAAACGTGTAGCAGACACTAAAGAAAACTTCATTAATGCTCCGTTAGTACCACTAAATACTACTAGTGGTGGTGATGGTTTTGTTGACCATGGAGCTATTGATAACTTAACAGCAGACTACAAAACACTTGCTGATGCTAAGTTATGTATTGGTAAAGGTTTGTCTGGTTCAGGTAACCTACGAGGTCAAATCAATGACTTCATTGGTGGTACTACTTTCTTAGGTGAAACCACAATCAATAACATGTTCAACGCTACTCGTGATGACTTAGTGGTTATGCCTCAAGTAGAGTTCCATGCTTCTATTGGTGAAGACACTCACCCTACTGTGAGTTGTACTGGTGGACTAGATGGTGCAGTGGTTGGAGGTACATCTGATGACTTCAAACCAGTTGACCCATCATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
862d22bf317c5a4c6d4ae662874950426db86b73dcbfd5eded0d395662f1612f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5961
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50