Protein

View in Explore
Genbank accession
AXG67193.1 [GenBank]
Protein name
short tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MAEMIPVVSATGAQSWSDSITVQGHTDALTFRVVGGTFDDATTEKDISPSSGSDYAVSLMANVIVAASATQPVLLYYKDGDLWVLAHSLSRIFVTPQTKELDYRLVVKGMDAMPKGAAVNPTYGGLVLGGGVRIPTVQDMQQSAVAKFSDFESTFFDLTKPVSIVYDRVARALYYIHTDGAVTNTKIFGGMYDVDIAGYKVSYDSTGKRSAVVFHTSGQIDVLDEAMTQFGEPKQLGYKVNRVVCRRAGVGTNTVDSYVAFDLDGRAHYLNDSFVETSVKSDRFYVNGSDSYDVLSTLDGKLVGGNTAAAPANVFWYQFVPSSLLVFGHDGTNIYQFNLRDNVQNVAARPLVANDLVVFNTTAAWSAKGGKLVAGMDTNGSNALFDFASSDSPVQTRGGWPYIELLTPPYTQEDTYDRLFYYTARPTTGLKHLAIRDYTVNMPDLSAVDLGPSVTFKVVVDAGDPDIGLPITAPEGVTVAATIEETTVDEDGVEHTTTVPVTKVYDGQEVTITLSHAYITSTSFPISIGRSVYQFEMKADDTPNAFSWQNILGIDNDTWNRTEDVTISGINVSVPVSVLVDGVEDYSRVKIFVDGIETAMPVFIRNNQTLGFSILHENDTTRIDVDVGQGTSRFGLYTIVEAQIDVGRHWAYMPVGKQVQSDVFTNTGTIPLTLTIDTTDAQFAQGGQTVTLPVGGTTSIKFTPTENKQYTIKFHSDQYSYEWYVWADAQWLGTAAPTKRAERYVMGDSGTLFVDNIPDNFWTYITVPAGMLLDVDGVRVEQELDSRGVYKEQGLVIGPFECADTMLKIYGLPSHDQPHTLMFGDAPFGWLYDMTVDPSYTAYADVAVESFGVTHSDAVREAVTSVDAKTYSAAGSSVVLVTPVYDPELDEQLKWLDFSDAQTHIGDSTGRTVEAGPTVDKQIIAGPQFDTGHKDFVDNFRMFDLIAQSDIVIDKFDLFELTQGQKDVIEAMPLPAFADKTESVTADTFPLFELTQGQVDTAAEFPLFEATVGADVVSDTFWPDFTEALYVVSDTFINNFIEHLDNEPQYFDLRSPEYRTGIKAKSDQILPKFAQVKGVYPADASRARYVQDLGINKAEALAPRQAATGGVFAQEMTEARYVPPGTTYHVGWAQPQWAPALVTYKVDAMSPRYVDPIYHPAILFLPEIPYVRRLPIAPIYHMAPAEAEHSKPSVIYHVGSAESEWYQHKQAADRLPAFGPEVTANPVSYRHLIEGQFIKTSQSGKTEELGARQVNTSTVISVARQAGNPVTPKPIRVEIQKSRKATSTAYGVAAPVVEAWTVEPNHGSIDKPLEEGYFATELDALQNATQVWGFDPSVVYAIQQPNGYWTWAQITVCEESCGSMSCAARGYLSGG
Physico‐chemical
properties
protein length:1375 AA
molecular weight: 150580,63570 Da
isoelectric point:4,61120
aromaticity:0,10764
hydropathy:-0,15375

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Dickeya phage vB_DsoM_AD1
[NCBI] 		2283029 Uroviricota > Caudoviricetes > Alexandravirus >
Host Dickeya solani MK10
[NCBI] 		1224151 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Pectobacteriaceae > Dickeya > Dickeya solani

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXG67193.1 [NCBI]
Genbank nucleotide accession
MH460463.1 [NCBI]
CDS location
range 116916 -> 121043
strand -
CDS
ATGGCTGAAATGATTCCTGTTGTGTCGGCTACTGGTGCACAGTCTTGGTCGGACAGTATCACTGTTCAAGGCCACACTGATGCGCTAACGTTTCGCGTAGTAGGCGGTACGTTTGACGATGCGACTACAGAAAAGGATATCTCGCCGAGTTCTGGTTCAGACTACGCAGTTAGCCTTATGGCCAACGTTATCGTAGCTGCTTCCGCCACGCAACCTGTTCTGCTGTATTACAAAGACGGTGACTTGTGGGTGCTTGCGCACTCTCTGTCTCGCATCTTCGTTACACCACAAACGAAAGAGCTGGACTACCGTCTTGTCGTCAAAGGTATGGATGCAATGCCGAAAGGCGCTGCTGTCAATCCTACTTATGGTGGTCTTGTGCTTGGTGGCGGTGTACGCATACCTACAGTGCAGGACATGCAGCAATCGGCAGTGGCAAAGTTCTCGGACTTTGAATCCACGTTCTTCGATTTAACCAAGCCTGTATCAATCGTCTACGACCGTGTGGCTCGCGCTCTCTACTACATCCACACAGATGGTGCTGTGACGAATACGAAAATCTTCGGCGGCATGTACGACGTTGATATCGCAGGCTACAAGGTCAGCTACGACTCTACAGGTAAACGTAGCGCCGTCGTATTCCACACGTCAGGTCAGATTGACGTGCTTGATGAAGCGATGACGCAGTTCGGTGAGCCTAAACAACTCGGCTATAAAGTTAACCGCGTTGTGTGTCGTCGTGCTGGTGTTGGTACAAACACAGTTGATAGCTACGTTGCATTTGACCTTGATGGTCGTGCGCACTATCTGAATGACTCGTTCGTCGAAACGTCAGTTAAGTCAGATCGTTTCTACGTTAACGGCTCGGATAGTTATGATGTGCTGTCAACACTGGACGGTAAGCTGGTGGGTGGTAACACTGCTGCCGCACCTGCAAACGTCTTCTGGTATCAGTTCGTTCCGAGTTCGTTACTTGTATTCGGGCACGACGGTACCAACATCTACCAGTTCAACTTGCGCGATAACGTCCAGAACGTTGCTGCGCGTCCGCTTGTCGCTAATGACCTTGTTGTGTTTAACACGACTGCTGCGTGGTCTGCGAAAGGCGGTAAGCTCGTTGCTGGTATGGACACGAACGGTAGTAATGCACTGTTCGACTTCGCATCCTCAGACAGTCCTGTGCAAACGCGTGGCGGCTGGCCTTACATTGAACTCCTGACACCTCCGTATACTCAGGAAGATACGTATGACCGCCTGTTCTATTACACCGCACGTCCAACGACTGGCCTGAAACATCTCGCTATTCGTGACTACACCGTGAACATGCCTGATCTGAGTGCTGTAGACTTAGGTCCGTCTGTAACGTTCAAGGTTGTTGTCGATGCGGGTGACCCTGATATCGGACTGCCTATCACTGCTCCTGAGGGAGTAACTGTTGCGGCCACGATTGAAGAAACGACTGTAGACGAAGATGGCGTAGAGCACACAACAACCGTGCCTGTGACCAAAGTGTATGATGGCCAAGAGGTCACTATCACACTCAGTCATGCGTATATCACCAGCACGTCATTCCCGATCTCTATCGGTCGATCTGTTTATCAGTTCGAGATGAAAGCTGATGATACGCCTAATGCTTTCTCATGGCAGAACATTCTGGGCATTGATAACGACACATGGAACCGTACCGAAGATGTTACGATCAGTGGCATCAACGTTTCTGTTCCTGTTAGTGTGCTGGTGGATGGTGTAGAAGACTATAGCCGCGTTAAGATTTTTGTCGATGGTATCGAGACAGCAATGCCTGTCTTTATCCGCAACAATCAAACACTCGGTTTCAGTATTCTGCATGAGAACGACACGACTCGCATTGACGTCGATGTTGGTCAAGGCACTTCTCGCTTCGGCCTGTACACGATTGTTGAGGCGCAGATTGACGTCGGTCGTCATTGGGCATACATGCCTGTCGGTAAGCAGGTACAGTCGGATGTGTTTACGAACACAGGCACAATCCCACTCACTCTGACAATCGACACGACGGATGCGCAGTTCGCACAAGGCGGCCAGACAGTCACGTTGCCTGTTGGTGGAACCACCAGCATTAAGTTCACGCCTACAGAGAATAAGCAGTACACGATCAAGTTCCACTCAGATCAGTACAGCTATGAGTGGTATGTGTGGGCAGATGCTCAGTGGCTAGGTACTGCTGCTCCGACTAAACGCGCAGAGCGTTATGTTATGGGCGATAGTGGTACGTTGTTTGTCGATAACATCCCAGACAACTTCTGGACGTACATCACGGTGCCTGCAGGTATGCTGCTGGATGTTGATGGTGTGCGTGTCGAACAAGAGCTTGATTCGCGCGGTGTGTACAAAGAGCAGGGTCTCGTCATCGGTCCGTTTGAATGCGCAGACACGATGCTCAAGATCTATGGCCTGCCGTCGCATGACCAGCCTCATACTTTGATGTTTGGTGATGCACCATTTGGCTGGCTGTATGATATGACGGTTGATCCGTCGTACACTGCTTATGCCGATGTTGCTGTCGAATCATTTGGCGTAACACACTCTGATGCGGTGCGTGAAGCCGTCACCTCAGTCGATGCGAAAACCTATAGCGCTGCCGGCAGTTCTGTTGTTCTCGTTACGCCTGTGTATGACCCAGAGCTTGATGAACAACTCAAGTGGCTGGACTTCTCTGATGCTCAGACACACATTGGAGATTCGACTGGACGTACTGTTGAGGCAGGTCCTACTGTAGACAAGCAGATTATCGCAGGTCCTCAGTTCGATACGGGTCATAAGGACTTCGTGGATAACTTCCGCATGTTCGACCTGATCGCTCAGTCTGATATCGTGATCGATAAATTCGATTTGTTCGAGCTTACGCAAGGACAGAAAGACGTTATCGAAGCGATGCCTCTGCCTGCATTTGCCGATAAGACAGAGAGCGTAACAGCGGACACGTTCCCACTGTTTGAGCTTACTCAAGGCCAAGTTGATACTGCTGCCGAGTTCCCCCTGTTCGAAGCTACGGTTGGCGCCGATGTTGTGTCAGATACGTTCTGGCCTGACTTCACCGAAGCACTGTATGTTGTTAGTGATACGTTCATCAATAACTTCATCGAACATCTGGATAACGAACCTCAGTATTTCGATTTGCGTAGCCCTGAGTATCGTACAGGCATCAAGGCTAAGTCTGATCAGATTCTGCCGAAGTTTGCACAGGTGAAAGGCGTCTACCCTGCTGATGCTAGTCGTGCGCGTTACGTGCAAGATCTTGGCATCAATAAAGCAGAAGCGTTGGCACCACGTCAGGCAGCAACTGGCGGTGTGTTTGCTCAGGAAATGACAGAAGCACGTTACGTTCCTCCTGGCACAACGTATCATGTGGGGTGGGCACAGCCTCAATGGGCTCCAGCTTTGGTCACCTATAAAGTGGATGCTATGTCTCCACGCTATGTTGACCCTATCTATCACCCAGCGATTCTGTTCTTACCTGAGATTCCTTACGTTCGTCGTCTGCCTATTGCGCCTATCTATCACATGGCACCAGCAGAGGCAGAGCACTCGAAACCTTCTGTGATTTATCACGTGGGCAGTGCAGAGAGCGAATGGTATCAGCACAAACAGGCCGCAGATAGACTGCCTGCGTTTGGTCCTGAGGTTACAGCGAATCCAGTTTCTTATCGTCACTTGATTGAAGGTCAGTTCATTAAGACCAGCCAGTCAGGTAAGACGGAAGAGTTGGGCGCTCGTCAGGTCAACACAAGCACTGTCATTTCTGTTGCTCGTCAGGCTGGTAATCCTGTTACCCCTAAACCTATTCGTGTAGAGATTCAGAAGTCACGCAAAGCCACCAGCACAGCTTATGGCGTTGCAGCTCCTGTTGTCGAAGCATGGACGGTTGAGCCAAACCACGGTTCGATTGATAAGCCTCTTGAAGAGGGCTATTTCGCTACGGAACTTGATGCGTTGCAGAACGCTACTCAGGTCTGGGGCTTCGATCCTTCTGTGGTGTATGCTATCCAGCAGCCTAATGGCTATTGGACTTGGGCGCAGATTACTGTGTGCGAAGAATCTTGCGGTTCTATGTCCTGTGCCGCTAGAGGATATTTGAGCGGGGGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3f48e4acb6ec202f45c56d806d9645982c46fcb4f8b9510faa9a599553d7bce0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3816
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Jumbo Bacteriophages Are Represented Within an Increasing Diversity of Environmental Viruses Infecting the Emerging Phytopathogen, Dickeya solani Day,A.W., Ahn,J. and Salmond,G.P.C. 2018 — GenBank