Protein

View in Explore
Genbank accession
XUL01396.1 [GenBank]
Protein name
baseplate hub
RBP type
TF
Evidence RBPdetect2
Probability 0,78
Protein sequence
MTWGADAVSTLSTSQPTRQFGRALRLEVGNDSEGIIIENLRVTFDIQKGNAKHPNKATITVFNLKESNRYKLATKVWDYVRLSVGYGLNNITYHRIFEGNISRVNDQRNGMDIQTVMECGDGRTAFTQSFVSSTMAKGATYDDVIDACLGQMDGIEEGYICVDKETPFTRARTLYGQASHILDGVAKANNATWSIQDNKLTIIPNDSVTDADAIILSASSGMVGAPKGTDKGLEVSANLNPEFAIGGFIQVDSMFTQYNGQYKIDTVRFRGDNHPKGPWLADLTLLGGEFAKKLRRTKKPKKPRKPVEYIYSTDVGDTGVRG
Physico‐chemical
properties
protein length:322 AA
molecular weight: 35439,53730 Da
isoelectric point:8,27640
aromaticity:0,08385
hydropathy:-0,42453

Domains

Domains [InterPro]
NF047561
Unmapped
20–273
NF047561 DC_2275
IPR054496
ATT
25–285
IPR054496
IPR054496
ATT
30–270
IPR054496
XUL01396.1
1 322
Architecture
ATT
RBD
ATT 25-285 | RBD 286-322
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_SE1_KM
[NCBI] 		3425682 Viruses >
Host Salmonella enterica subsp. enterica
[NCBI] 		59201 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Salmonella

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XUL01396.1 [NCBI]
Genbank nucleotide accession
PV660647 [NCBI]
CDS location
range 19581 -> 20549
strand +
CDS
ATGACATGGGGAGCCGATGCAGTGTCTACATTATCGACAAGTCAGCCTACCCGGCAGTTTGGCCGAGCCTTACGTCTTGAGGTCGGTAACGACTCCGAAGGCATTATAATTGAAAACCTTCGTGTTACCTTTGACATTCAGAAAGGTAACGCGAAGCATCCCAATAAAGCTACCATAACCGTATTCAACCTGAAAGAGTCGAATCGTTACAAACTGGCAACCAAGGTTTGGGATTACGTCCGCCTCTCTGTGGGTTATGGCCTTAACAATATTACCTACCACCGAATCTTTGAAGGTAACATCTCCCGTGTAAATGACCAGCGTAACGGTATGGATATTCAGACTGTTATGGAGTGTGGCGACGGGCGAACTGCCTTTACACAAAGCTTTGTATCTTCTACCATGGCCAAGGGTGCAACGTACGACGATGTTATTGATGCATGCCTCGGACAAATGGATGGTATTGAAGAAGGCTATATTTGTGTAGACAAAGAAACTCCTTTCACGCGTGCTCGTACGTTGTACGGTCAGGCGTCGCATATTCTTGATGGTGTTGCAAAAGCCAATAATGCAACATGGTCAATCCAGGATAATAAGCTAACCATTATTCCGAACGATTCCGTTACGGATGCTGATGCTATTATTCTGTCAGCTTCTTCTGGTATGGTTGGTGCACCCAAAGGCACAGACAAAGGTCTGGAGGTGTCAGCTAACCTGAATCCTGAATTTGCTATCGGCGGATTCATCCAGGTAGATTCTATGTTTACACAGTACAACGGACAGTATAAAATTGACACCGTAAGATTCCGGGGAGACAATCATCCCAAAGGACCTTGGCTGGCAGACTTGACGCTTCTTGGCGGAGAGTTTGCCAAAAAGCTACGTCGTACTAAGAAGCCGAAGAAGCCACGTAAACCTGTTGAGTATATCTATTCCACAGACGTAGGTGACACAGGCGTGAGAGGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f4e6b0ce14de2abe5c36f840781db0da1bda71191860f60511cca6b8832eed6b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8907
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50