Protein

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Genbank accession
YP_009191633.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,84
Protein sequence
MAKNDFKPFATGKGANVTSQPDWEALPALLSGFTAGKASSAQVNKALRQASFIAAALAQYTASKSGQDVLDDGDLSGFIAKMSAAFGKDFQTLDATLTALSGLATGADKLPYFTGNDTAGQTDLTSVGRDIIGKASIADILTYLGIYDASTSQKGLVRLNGGVTNADDTLAATSGAVKIANDAAIAAADIAKTKWSAVDATISQKGIVMLSDNTGVPDSTTAATTTAVNHVLNQAMSAYSLAESKYTAGGATTGKAGLVQLVNSMGGSGSLVMPQAAVTTAIQTYPSLGKGQTLQDLRGSRSIDATYTNSTGFPIAVYVRIAGGASANLYAHVNGIEFGGGGSIASNTSIATAFFIVPNGATYRVMASGSSIALQAWSELR
Physico‐chemical
properties
protein length:381 AA
molecular weight: 38604,77100 Da
isoelectric point:6,12022
aromaticity:0,06824
hydropathy:0,09370

Domains

Domains [InterPro]
DC_1450
STR
1–337
DC_1450
IPR005068
STR
150–188
IPR005068
YP_009191633.1
1 381
Architecture
STR
STR 1-337 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SEN34
[NCBI] 		1647463 Uroviricota > Caudoviricetes > Brunovirus >
Host Salmonella enterica subsp. diarizonae
[NCBI] 		59204 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Salmonella

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009191633.1 [NCBI]
Genbank nucleotide accession
NC_028699.1 [NCBI]
CDS location
range 19544 -> 20689
strand +
CDS
ATGGCTAAAAATGATTTTAAACCGTTTGCGACGGGTAAGGGTGCTAATGTTACATCACAGCCTGACTGGGAAGCGCTGCCGGCGCTCCTGTCTGGTTTTACTGCGGGAAAGGCATCCAGTGCACAGGTAAATAAAGCGCTGCGTCAGGCGAGCTTCATCGCTGCAGCACTGGCACAGTACACAGCCAGCAAGAGCGGACAGGATGTACTCGATGATGGTGACCTGAGCGGCTTTATCGCCAAAATGTCCGCTGCGTTCGGTAAGGATTTTCAGACTCTTGATGCCACGCTGACGGCGCTCTCTGGTCTGGCTACCGGTGCAGATAAACTCCCGTATTTCACGGGGAATGATACCGCCGGACAGACAGATCTTACTTCTGTTGGGCGCGACATCATCGGAAAAGCCAGTATTGCGGATATTCTCACATACCTTGGTATCTACGACGCCAGCACATCGCAAAAGGGGCTTGTCAGGCTAAATGGTGGCGTAACCAATGCTGACGATACGCTGGCAGCAACTTCCGGAGCAGTGAAAATTGCTAATGATGCGGCAATAGCTGCGGCGGATATAGCTAAAACGAAATGGAGTGCAGTCGATGCCACAATATCTCAGAAAGGTATTGTCATGCTCAGTGATAATACCGGCGTCCCTGACTCAACGACTGCCGCAACAACTACCGCTGTAAATCACGTGCTGAATCAGGCTATGTCCGCATATAGTCTGGCAGAATCAAAATACACCGCAGGAGGAGCAACCACTGGAAAAGCTGGTCTTGTTCAGCTTGTGAATTCAATGGGAGGGTCTGGTTCACTGGTGATGCCACAGGCGGCTGTAACTACCGCAATACAGACGTATCCGTCTCTCGGCAAAGGTCAGACATTACAGGATTTAAGAGGCTCTCGTAGTATAGACGCAACTTATACCAACTCAACCGGTTTCCCGATTGCGGTTTACGTCCGTATTGCAGGGGGGGCCTCAGCAAATTTATACGCTCATGTAAATGGAATAGAATTTGGTGGAGGTGGGTCAATAGCATCTAATACATCCATAGCAACGGCATTTTTTATTGTTCCCAATGGCGCAACTTACCGCGTAATGGCTTCTGGTTCCTCCATTGCATTACAGGCGTGGTCGGAGTTGAGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
606ab1507fe62ab9223ab78a8cff09e501c2b8cade8feb8fd0378b02c8d96f74
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8238
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Phages of Salmonella enterica subsp. salamae and subsp. diarizonae: novel phages with a mosaic genome structure and activity against pathogenic S. enterica subsp. enterica isolates Pastekova,L., Bosak,J., Dedicova,D., Benada,O., Smarda,J. and Smajs,D. — — GenBank