Protein

View in Explore
Genbank accession
WNY41175.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MTQPTKNPIPSGNILDQIFNGEKLDEVVNSDDLEYTDRFGKKRFTLSGIYNFIQTWLSGLSGVTGASKIGTADGSNVEDRLSVPSTRAPAVMTRKVGDLLLDGTAGLRKNFGAKGDGSADDTEAFNDWWACLMDVTYKRAAAGANELPFMLQKGPLLTIENGCFIYTGPGLDITSSNSFVFNVRGESMLSTKIILSSGYLFDFTNNPVRSGLSDMTISGGKGAVRYKSTSRNASGMHLFERLVMSRYTECAIGNNSIDMPYVRVRDSFFYGDVTKDTIGVCISGYSAGGVIDNCTFADNLYGIKLALGTNGTTTNGPATPFNISRNDWYRTGNRTGNSHDVWIEPGITTNNAGRGLVFLANKFGQEFLVEGDTHILLANSGVGLTDNLNNDRHHVETTSIGYLSGVRFLANNVINTNGSVVAPMIKSYTPNVGNLYFSDLYDSGMPKYIIEFASSIGQTAIGNLSRTNVFDASHCLALQEGSDINPLSNLNDVFKTIDPLSYLSGHPQASSLNIGIQKVDYNNLYSGITADLTAVSATKTPMNNSYGGLNEAMEVTAADATARVYALINPIAGKKTWIDFEVKMSSSTPTKSVLAEIFNSDGSVLLYRRNILLDTNPRWQKCVLPFIPNDTGQLIVRFRPGTFIAGSQTKFIIGNLNIYNNDMPLSTGHNSGLSKSYSRQHIVNGDVHEWYDSTGNKRAKVGTPTSDTDGVIISAAVVS
Physico‐chemical
properties
protein length:719 AA
molecular weight: 77785,37490 Da
isoelectric point:5,87126
aromaticity:0,09040
hydropathy:-0,19861

Domains

Domains [InterPro]
DC_1559
ATT
1–147
DC_1559 DC_0672
IPR012334
STR
105–474
IPR012334
IPR012334
STR
109–474
IPR012334
IPR011050
STR
114–472
IPR011050
WNY41175.1
1 719
Architecture
ATT
STR
RBD
ATT 1-147 | STR 148-474 | RBD 475-719
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WNY41175.1
1 719
Domain Start End Length (AA) Confidence
N-terminal 1 119 119 0,9794
Central domain 120 502 384 0,9781
C-terminal 503 719 216 0,9890
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-119
Central
120-502
C-terminal
503-719

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage YC1
[NCBI] 		3076791 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WNY41175.1 [NCBI]
Genbank nucleotide accession
OR493421.1 [NCBI]
CDS location
range 241888 -> 244047
strand -
CDS
ATGACACAGCCAACTAAGAATCCTATTCCTAGCGGGAATATTTTAGATCAGATTTTTAACGGGGAAAAACTCGACGAAGTCGTTAATAGCGATGATCTTGAATACACTGATAGATTCGGTAAAAAGAGATTTACACTAAGTGGGATTTATAATTTCATCCAAACGTGGTTAAGTGGGTTATCGGGCGTCACCGGGGCGAGCAAGATAGGTACTGCTGACGGCAGTAATGTCGAAGATCGTCTCTCAGTTCCTTCTACCAGGGCCCCGGCGGTAATGACGAGGAAAGTAGGCGATCTCCTTTTAGACGGCACCGCTGGGCTGAGAAAGAACTTCGGGGCTAAAGGTGACGGTAGCGCCGACGACACCGAGGCTTTCAACGATTGGTGGGCGTGTTTAATGGATGTCACGTATAAACGAGCTGCTGCAGGTGCTAACGAACTACCCTTTATGTTGCAGAAAGGACCGCTGCTGACTATAGAGAACGGTTGTTTTATTTACACCGGTCCTGGGCTGGACATAACTTCCTCTAACTCTTTCGTGTTTAACGTTAGGGGTGAAAGCATGTTATCGACTAAGATCATTCTGTCATCAGGATATTTATTTGACTTTACAAATAATCCGGTGAGAAGTGGTCTGAGTGATATGACTATTTCTGGTGGTAAGGGGGCAGTAAGATATAAGTCGACTTCTCGAAATGCTTCCGGCATGCATCTTTTTGAAAGGTTAGTTATGTCGAGATACACCGAGTGTGCGATCGGCAATAATTCCATCGACATGCCGTACGTTAGGGTCAGGGATTCATTCTTTTACGGTGATGTCACTAAGGATACGATAGGTGTTTGTATCTCTGGTTATAGCGCCGGCGGGGTGATCGACAACTGTACTTTTGCCGACAACCTTTATGGGATTAAATTGGCTTTGGGTACAAATGGGACTACGACAAATGGTCCGGCGACCCCTTTCAATATCTCAAGAAACGATTGGTATAGAACAGGCAATAGAACCGGGAACTCTCACGATGTTTGGATTGAACCGGGCATAACGACCAACAACGCAGGACGCGGTTTGGTGTTCTTGGCGAACAAGTTCGGACAGGAGTTCCTTGTTGAAGGCGACACGCATATTCTTTTAGCTAATTCGGGCGTAGGTTTAACTGATAACCTTAATAATGACAGACACCACGTGGAAACAACTTCCATCGGATACCTGTCTGGGGTGAGATTCCTGGCCAATAATGTCATCAACACTAACGGTTCTGTTGTAGCTCCGATGATCAAGTCATACACGCCTAATGTGGGGAATCTGTATTTTTCTGATTTGTACGATAGCGGAATGCCTAAATACATTATAGAGTTCGCTTCGAGTATAGGTCAGACGGCGATAGGTAATCTTAGCAGAACGAACGTGTTTGACGCATCTCATTGCTTGGCTTTACAGGAAGGTAGTGATATCAACCCGCTGTCCAATTTAAACGACGTCTTTAAAACGATCGATCCGCTGTCTTATTTATCAGGACACCCTCAGGCCTCGTCCCTAAACATAGGGATCCAGAAGGTAGATTATAATAACCTTTACTCTGGTATAACAGCCGACCTCACTGCAGTGTCTGCAACTAAAACCCCCATGAATAACTCATATGGGGGTTTAAATGAAGCAATGGAAGTAACGGCAGCCGACGCCACTGCTAGGGTATACGCCCTGATAAATCCAATCGCGGGTAAAAAGACCTGGATCGACTTTGAAGTTAAGATGTCGTCTTCCACGCCAACCAAAAGTGTGTTAGCTGAAATATTTAACTCCGACGGTTCCGTTTTACTATACCGGAGAAATATTCTGCTTGACACTAACCCCAGATGGCAAAAATGCGTATTGCCCTTTATACCTAATGATACGGGACAGCTTATTGTTAGATTTAGGCCGGGTACATTTATTGCCGGGTCTCAAACTAAATTTATAATAGGCAACCTGAATATTTATAACAACGACATGCCGTTGTCAACCGGACATAATAGTGGGCTGAGTAAATCATATTCACGACAACATATCGTTAATGGCGATGTTCATGAGTGGTATGACTCGACAGGGAATAAACGCGCTAAAGTCGGAACACCCACATCCGATACTGACGGTGTAATAATTAGCGCTGCCGTAGTGAGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d29702b997701d65fc68c229f37e176845945d12b0a79b97c9f5096ef37ac87e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6678
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50