Protein

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Genbank accession
WVH13998.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MADITDYVNIDQLPPAENIFGNELLEVLQAGNNHRATVIQLSEPAFDRIGAISLNVKNFGAVGDGSTDDRAAIQAAVDAAAIENVPLIFPNGRYLISNRISLRSNSHIYANGDATIESSADYQSGVASLMYGSAKNNVKISGLKFDTSRGYYTGHIWLANCTDVTIDKCNFISDWSKSTGSIRYGTHINGGSDISITGSFFDGIARPIWVIGSGKRIRIDDNRLQNMRSFGIIFSESTLFWEGVRIRGNYIDGYGSQSSLIYIGALAGNSALTGYHTDLVVADNFGLGSDLPYVTDGDLRGNGDLFSLRAMENARVYGNYVLNGGDLGLVIEYSKNVTVSGNIAARNEISGIVLHKAENVTLVNNICYDNCLDRSGRATLLSERGGIRVMAGSLNAVIVGNRCYDTRASGKTQLWGIVVTTQDQGSVGQNTGRVYVGTNMLSGNRIGGVFWNPNLQLQPSLDFEIAVSGATPNEMWARNTVCRHTTVAQGLPFMSVVRAAGTAVTIDPAESGYDTVKLDDVSNITDLSKLAIQNSSGGVFFIGVSSVDYVNNTVKLSGAIPAPGIQAGATVFYTTWRTAVSYQ
Physico‐chemical
properties
protein length:583 AA
molecular weight: 62479,19130 Da
isoelectric point:5,37176
aromaticity:0,08576
hydropathy:-0,04871

Domains

Domains [InterPro]
DC_0729
ATT
1–55
DC_0729 IPR011050 DC_2234
IPR012334
STR
45–288
IPR012334 IPR012334
IPR011050
STR
46–288
IPR011050 IPR007742 IPR006626
IPR051801
Unmapped
50–235
IPR051801 IPR006626 IPR011050
IPR024535
ENZ
54–205
IPR024535 IPR006626 IPR006626 IPR006626 IPR006626
IPR006626
Unmapped
161–190
IPR006626 IPR022441
WVH13998.1
1 583
Architecture
ATT
STR
RBD
ATT 1-55 | STR 56-479 | RBD 480-563 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WVH13998.1
1 583
Domain Start End Length (AA) Confidence
N-terminal 1 67 67 0,9786
Central domain 68 496 430 0,9919
C-terminal 497 583 86 0,6898
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-67
Central
68-496
C-terminal
497-583

Taxonomy

  Name Taxonomy ID Lineage
Phage Alcaligenes phage CASP1
[NCBI] 		3104531 No lineage information
Host Alcaligenes faecalis
[NCBI] 		511 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WVH13998.1 [NCBI]
Genbank nucleotide accession
OR960973 [NCBI]
CDS location
range 45340 -> 47091
strand +
CDS
ATGGCTGATATTACAGATTACGTAAATATTGATCAGTTGCCGCCAGCTGAAAATATATTCGGAAACGAGCTTCTGGAGGTTTTGCAGGCAGGAAATAATCATAGGGCAACTGTGATCCAGCTGTCGGAGCCTGCTTTTGACAGGATTGGCGCTATTAGTCTGAACGTAAAGAACTTCGGCGCTGTTGGCGATGGCTCAACCGATGATAGAGCGGCAATCCAGGCCGCTGTGGACGCCGCCGCAATCGAAAACGTACCGCTTATTTTCCCTAATGGCAGGTATCTAATTTCAAATAGAATTTCACTTCGGAGTAATTCCCATATTTATGCGAATGGCGATGCCACGATAGAGTCTAGTGCGGATTACCAATCTGGCGTAGCCAGCCTAATGTATGGTAGCGCTAAAAATAACGTAAAGATTTCCGGGTTAAAATTCGACACTTCAAGAGGGTATTATACTGGCCATATCTGGTTAGCAAATTGCACTGATGTGACTATAGATAAGTGCAATTTTATATCAGACTGGTCTAAATCCACAGGGAGCATTCGTTACGGAACCCATATTAATGGTGGGAGTGATATTTCTATTACTGGTTCATTTTTTGATGGAATTGCTCGTCCTATTTGGGTGATTGGCTCAGGTAAAAGAATTCGCATTGATGATAACAGACTTCAGAATATGCGTAGCTTTGGGATTATATTTTCTGAATCAACTCTTTTTTGGGAAGGTGTTAGAATCCGAGGAAATTATATAGATGGTTACGGCTCGCAAAGCAGCTTAATATATATCGGCGCACTAGCTGGGAATAGCGCCCTGACAGGCTACCATACAGATTTAGTAGTTGCGGACAACTTCGGGCTTGGCTCAGATTTGCCTTATGTAACAGATGGCGATCTTCGCGGCAATGGCGATCTGTTTAGTCTGCGTGCTATGGAAAATGCGCGAGTGTATGGGAATTACGTCCTGAATGGCGGTGATCTTGGCTTGGTAATAGAATATTCTAAGAATGTCACCGTCTCTGGAAATATTGCTGCAAGGAATGAGATTTCCGGAATCGTACTGCACAAGGCTGAAAACGTAACTTTGGTAAATAATATTTGTTACGATAACTGTCTTGATCGTTCCGGAAGGGCGACTCTACTTTCGGAGCGCGGCGGAATACGAGTTATGGCCGGAAGTTTAAACGCCGTTATTGTCGGTAATAGATGCTACGACACAAGGGCGAGCGGAAAGACACAGCTATGGGGCATAGTAGTGACAACACAAGATCAGGGTTCTGTGGGGCAGAACACTGGCCGGGTTTATGTTGGAACAAACATGCTTTCTGGAAATAGGATTGGGGGGGTGTTTTGGAATCCAAATCTACAGTTACAGCCTAGCCTAGATTTTGAAATAGCTGTGTCCGGGGCAACGCCAAACGAAATGTGGGCAAGGAACACTGTCTGCCGTCACACTACTGTGGCTCAAGGCTTGCCGTTTATGTCAGTGGTTAGAGCGGCGGGCACTGCTGTGACTATAGATCCAGCCGAATCTGGTTATGATACTGTGAAGCTGGATGATGTTTCTAACATCACCGATCTATCTAAGCTGGCAATACAGAATTCATCCGGTGGAGTCTTCTTCATAGGTGTATCATCTGTTGATTATGTTAATAATACCGTTAAATTGTCTGGAGCTATACCAGCCCCAGGCATACAGGCTGGGGCAACGGTTTTTTATACAACATGGCGTACTGCTGTTTCTTATCAATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
41888a2eeb62be987253cca355fae1d030a2341bf6ef8dcf21bdebb2ea896977
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7754
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50