Protein

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Genbank accession
YP_006906093.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,62
TF
Evidence RBPdetect2
Probability 0,92
TF
Evidence UniProt/TrEMBL
Probability 1,00
Protein sequence
MSRELMPKSGIMMPHVVVTRDAAVVGVSTVDGQAGAVNLTDKYLQKTDAAATYQTKVEGASKDFVLDSIQPIMSGALFRADPWVVNDTPLRSTGANGVESVDMMKVTPDNSIKIGSYASSVQGVEIHSAGRLQVVDQNDSGVETKYPVYSKRYRPEIEDLPFAAIGSYVKDSKGRTIGVNRTGINSDIKQLTQKVTFTQPVTVADAVGDYDAVTLRQLRNSGGGSGGPTMSGISNFGIGDFHLRDSRAFIPAFEVVSDGQLLNRADYPDLWAYAQLLTPITDAAWLADAQQRGKYSTGDGSTTFRVPDRNGVQSGSLKELFARGDGGNSSNNGMAYDAALPNIVGYTAHTLLTAASNQGQVATDGAFTSTTSTSGVWPLSGGGGLYTNIQLNANNSDATYGRYGITANAIPRNFIGVWTIRAHGGFVAANTSWSVINSDASEQPSGTPITGGLVSSKYVVGGVDKYRSSIQLIGSNEVDLSTRITTINDRYSIGAATWDFKLDGKLVFNKSLNPTGTGYSPANTYVTLANTWLTSPYSGYVGFVGGGVGVSNGGWRNFISLGSLIFPDSAHPTAIISQVYDYDMATGNQPNGDIVRNTSFNAESYDITFGNNSGTTNYIFSKSPVSDERLKHSIKEEGTATALSNLNKMEYKTFIYNYDEKATVRRGFIAQQLEAIDPQYVRKYKTFKGTDTLALDENVLLLDAIAAIQELSKKVEALEAKLAEK
Physico‐chemical
properties
protein length:725 AA
molecular weight: 77652,53290 Da
isoelectric point:5,57394
aromaticity:0,08966
hydropathy:-0,26731

Domains

Domains [InterPro]
DC_1514
STR
20–339
DC_1514 DC_1985
SSF88874
STR
255–424
SSF88874 IPR030392 Coil
IPR030392
CHP
626–722
IPR030392
YP_006906093.1
1 725
Architecture
STR
RBD
STR 20-424 | RBD 445-725
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_006906093.1
1 725
Domain Start End Length (AA) Confidence
N-terminal 1 79 79 0,9299
Central domain 80 278 200 0,3673
C-terminal 279 725 446 0,8242
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-79
Central
80-278
C-terminal
279-725

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage NJ01
[NCBI] 		1237159 Uroviricota > Caudoviricetes > Mktvariviridae > Kuravirus > Kuravirus NJ01
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_006906093.1 [NCBI]
Genbank nucleotide accession
NC_018835.1 [NCBI]
CDS location
range 18898 -> 21075
strand +
CDS
ATGTCTAGAGAATTAATGCCCAAATCTGGTATAATGATGCCTCATGTAGTAGTAACCAGAGATGCGGCTGTTGTTGGTGTTTCTACGGTAGATGGTCAGGCAGGAGCTGTGAATCTGACTGATAAATATTTACAGAAAACTGACGCAGCTGCTACATACCAGACTAAAGTGGAAGGAGCATCTAAAGATTTTGTACTGGATTCGATTCAACCTATTATGTCTGGTGCTTTATTCAGAGCAGACCCTTGGGTTGTTAACGACACCCCTCTCCGTTCTACCGGAGCTAACGGTGTAGAGTCAGTGGATATGATGAAGGTTACTCCTGATAACTCAATTAAGATTGGCAGTTATGCTTCTTCTGTTCAAGGAGTAGAGATTCATTCTGCTGGTCGTCTTCAAGTAGTAGACCAGAACGACTCTGGTGTAGAAACTAAATATCCAGTATATTCTAAACGCTATCGTCCTGAGATTGAGGATCTGCCTTTCGCTGCAATTGGTTCTTATGTCAAAGATTCAAAGGGCCGTACTATTGGTGTAAACCGTACCGGTATCAACTCTGATATCAAACAACTCACCCAAAAGGTCACTTTTACCCAACCTGTTACTGTAGCAGATGCTGTAGGCGATTATGATGCAGTGACACTGAGACAGCTTCGTAATAGTGGTGGTGGTTCTGGTGGTCCTACTATGAGTGGTATCTCCAACTTTGGTATTGGTGATTTCCATCTTCGTGATAGTCGTGCTTTCATCCCTGCATTCGAAGTTGTATCAGATGGTCAGCTACTGAATCGTGCTGATTACCCTGATCTTTGGGCTTATGCCCAGTTGTTAACCCCTATCACAGATGCTGCTTGGTTGGCTGATGCACAGCAACGAGGTAAATATTCAACTGGTGATGGTTCTACTACCTTCCGTGTTCCTGATAGGAATGGTGTTCAGAGTGGCTCTCTGAAAGAACTCTTTGCTCGTGGTGATGGTGGTAATAGTAGTAATAATGGAATGGCTTATGATGCGGCACTTCCTAACATCGTAGGTTACACTGCCCACACTCTTTTAACTGCTGCGAGTAATCAAGGACAGGTTGCTACCGATGGAGCTTTTACCTCTACAACCTCAACCTCAGGTGTTTGGCCTTTGTCTGGCGGTGGCGGTCTTTATACCAACATTCAGCTTAACGCTAACAACAGTGATGCTACTTATGGTCGCTACGGAATCACAGCGAATGCTATCCCTCGTAACTTCATTGGTGTTTGGACTATCCGTGCTCATGGTGGTTTTGTAGCAGCTAACACTTCTTGGTCTGTTATTAACAGTGATGCTTCAGAACAACCTTCAGGTACTCCTATTACTGGTGGATTGGTTTCTTCTAAGTATGTAGTTGGAGGTGTGGATAAGTATCGGTCTTCTATCCAGTTGATAGGGTCTAATGAAGTTGATTTATCAACTAGAATTACGACTATAAATGATAGATATTCCATCGGGGCTGCAACTTGGGATTTTAAGTTAGATGGTAAACTTGTTTTTAATAAAAGTTTAAATCCTACCGGAACAGGATACTCCCCTGCTAACACCTACGTAACTCTTGCTAATACTTGGCTGACTTCTCCCTATAGTGGATACGTTGGTTTTGTTGGTGGCGGTGTTGGAGTTTCTAACGGAGGTTGGAGAAACTTCATCTCTTTAGGGTCTTTGATTTTCCCTGATTCAGCCCACCCTACTGCTATTATCTCTCAAGTGTATGATTACGATATGGCGACCGGGAACCAGCCTAATGGGGACATTGTTCGGAATACATCGTTCAATGCTGAGAGCTATGATATCACTTTCGGGAACAACAGTGGGACTACTAATTACATCTTCAGTAAATCTCCAGTCTCTGACGAGCGTCTAAAACATAGCATCAAAGAGGAGGGGACAGCCACAGCTCTTTCTAACCTAAACAAGATGGAGTATAAAACCTTTATCTATAATTATGATGAGAAAGCAACTGTAAGGCGTGGATTTATTGCCCAGCAACTTGAAGCTATTGACCCTCAATATGTTAGGAAGTATAAAACCTTCAAAGGTACTGATACTCTAGCTTTAGATGAGAATGTGTTGCTTTTAGATGCAATTGCTGCTATCCAAGAGCTTTCTAAAAAGGTTGAGGCTTTAGAAGCAAAACTAGCAGAGAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a9e7300e3c505896f0350467c8af04ad5d28a1508887eb74826e29eaf436af22
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5756
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50