Protein

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Genbank accession

QIQ50267.1 [GenBank]

Protein name

tail fiber protein

RBP type

Evidence UniProt/TrEMBL

Probability 1,00

Evidence GenBank

Probability 1,00

Evidence RBPdetect2

Probability 0,94

Protein sequence

MKHFKEDAVTIKGSGGGSSKKKQHTPVEQPNTLRAKVRGRILDLIAYGPIKGLVNGLKSVYLDDTPVENEDGSTNFQGITLTTRNGTPDQDYIPGFRTVENTIEVNAEVKLATPVIRSLTNNDADAVAVTVQLAGLVQQLDNGDSVGYNVPILIEVRKDGGGWEQAVSYTINGKTTSPYPKTFRIDLKHYGPGDFDIRVRRVTQESTSSKLQDKLTWTLITEIIDRRFSYPNMALVGIDVDSELFGSQMPARSYDMYLSETQVPSNWDPETRVYTGIWDGTFKEAYHDNPAWAYYDLATHPIIGAGLESVDKWELYRIAQYCDALVPDGYGDMEPRFTINTVFSAQEDAITALNTLANVFRGMTYWGNNTVIPVADMPEDPVLTVGPGSVLEGDFTYAGTSIRERHSVAVVMWNDPDDAGKPVPEVYEDPISIAEYGWRETRVTAVGCNSRGQARRMAMWILDSERHETQTMSYTGTSEHAFLRPGNIIEVADPFVQGARMSGRLLEVAANQVRLDKAPTEAIAQIGGTWYLSVMLPDLSLSRHEVSSVDGDVIHLVDPLATLPLVGAIWGMYSAGLQLPYYRVVSNREDQATGMYQITATEYDPNKYSRVELGLNIPERPISLLPTGLIPSPSNLEFQVYTYFAGSSRHQGLLISWEPPRDVRVETFVLDVKDPSQAGFRTVYAGPGVSFDLTDAEAGNWTIRVRAVASTGKLSNWTSRNVQISQLLLPSPPDSVTVEVATFSITLTPRSAYPEAIWEFWRSTVALSAENIETNAQQLPTGNYLVDANLKPDTQYYYYVRGTNQYGKSTWFGVQGKTLNNFDDILDAVLEDVTNGELFELINSQIDTKATQIAIDEANAIVNQAMIGVNEQLTLVNTNITAIEGEITDLRSDVDGQLEVVNDTLTDLQGQIDNAIDALEYLNTNAYVAGNFVKVGSSLYQAKIDVPADPTNAKAPPNGTYWRDAGSVISSADGLAARVTVNEASITSINGTLTAQATTITGIQSTLNGKADASALTSLTTRVTAAEGLITSQGSAITSLTSTVAGKADSSALNALTTRVTAAEGTITSQGSALTSLTSTVNNKADASAVNALTTRVTAAEGTIVSQSGAITDLTSAVGTKADASALSALTTRVSTAEGTLTSQGSSITSLSNTLNTLSGSGTNLLVDTYSWLSSLVLPDMETSLVTVAGVAIAGSASGFGIRATSSSNNTAQEFMLVPFNSAAGWNLPLEAGNYLLSFYASSATAATVRMALYDGVLRYSLSQALTTTRTRYTLLITIPAATKAGFTVYPNMLGSASINILFDSFMIEKQAGNGVVGSPFVAGPSAQAVAANSAALTGLTTRVTAAEGTITSQAGSLVSLNSTINALGGTGTNLVPAEYSSFSSTLPPIYKGPAITVASETDATSYSGSALKITSAATGSNYLYLADAIDDFNMRLVPGGKYIVSFTARADVAKLMRVRVRAPNSGGSPIETTLSDVSVTTTATRFSFLATMPAAVVDRGVLVFYPTQPVAAGTTYLTDIMVEKQVGNSVNPSEFVPGNSARADIVSATAISSMDTRVTSAEGTITSHTGSITTLTNSIAGKADASALSLLSGTVTTQGNTIDSHSGQLTSLGNIAYGLSTENLISDPTFFAGAPVIVNSGTVATVVQRTDGGVPAGGPTMRLGKLAVPTIAGNNYIRFNPLESRKDATTRLSVIGGEVYYFSIDVYKAGSGGRQMGLWAQPYGAASEIIDHDWMVASPVSISTTDNAWVTLNGMVTIPAGANSINLNLRVSNGNAVTIYFANPKLYKRSAEQSATSTAITALDSRVGVTEGTLTSQGAAITSLTNTVNVVGGTGSNLVPVEYCTFKQEGLPPMATRVSTSLSLLLNTKAYNGWSLMVTDTLTAAGYFSLFAHIDDMNLRMKPLQKYIVSFWGMADEVRTINIRLRFVNAAGTHVEGVVGSVTLNPTWQRVSTVITAPSTVVDEAEILFYTNPVSVPSSSHFDGFMVEEQVGPSTQPSSFVPGSATTALTATAAAITSLTTRVTSAEGTITSQAGAVTAIQASLAAGGGAGSNLVPDTYSWPTSTTLPAVVTSSTAPTLTLIGVAVAAAQSGFGFKTTSGSTATTLWYLLCPSNGASGYNMALEPGNYMVSYYASAPGAARMQVRLYDGAAGPISGVQILTTTRTRYTAILNVPATMKAGLMIYPNAAGINGTQVTVDSVMVEKMNSGATTAAPSPFVAGPAAERVTAQASAISSMDTRVTSAEGTITSQSSSITSLTSRVGTAEANITTTATTLASTNGTLTSMWAMKINTNVNGKNFIAGMGAGITTVGGITQSEILFQADRFALLNTSTNGIQMPFFIESGITYITSAMIKNASIMAAQIASAQINTGHIGTAQIITAHIADAQITNAKIGSLAVDTLKIAGNAVTVPVASYTTTPSVTVVITIDANYPIMVIGSLTQANFSTISLKRNGVQLWSEVPVAGTVCCRGIVDSPGAGTHTYVLASTHSGNVNGSSLILLACKK

Physico‐chemical properties

protein length:	2505 AA
molecular weight:	264003,54330 Da
isoelectric point:	4,97287
aromaticity:	0,07106
hydropathy:	0,02910

Domains

Domains [InterPro]

IPR053171
Unmapped
1–1148

IPR053171 DC_1045 G3DSA:2.60.120.260 G3DSA:1.20.5.340 G3DSA:2.60.120.260 DC_1278 DC_0237

DC_0129
STR
2–946

DC_0129 DC_0338 IPR008979 DC_2209 G3DSA:2.60.120.260 G3DSA:1.20.5.340 G3DSA:1.20.5.340

IPR055385
ATT
99–226

IPR055385 IPR032876 IPR003961 IPR003961 DC_0338 DC_0338 IPR008979 IPR015406

IPR057587
ATT
732–829

IPR057587

QIQ50267.1

1 2505

Architecture

STR

ATT

STR

ATT

STR

ATT

STR

RBD

STR

RBD

STR 2-98 | ATT 99-226 | STR 227-345 | ATT 346-507 | STR 508-731 | ATT 732-829 | STR 830-946 | STR 1008-1270 | STR 1292-1389 | STR 1391-2066 | RBD 2098-2221 | STR 2222-2292 | RBD 2293-2380 |

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR053171	Unmapped	-	1	1148	InterPro	Viral Tip Attachment Protein	-	-	-	-
DC_0129	STR	DC_0129	2	946	Novel HMM	DC_0129	Central	Low	Positional only	234 proteins / 234 hits
IPR055385	ATT	DC_0360	99	226	InterPro cluster	Tip attachment protein J, HDII-ins2 domain	N-terminal	High	Text match	1136 proteins / 1139 hits
IPR032876	ATT	DC_0307	346	507	InterPro cluster	Tip attachment protein J	Central	Medium	Text match	1111 proteins / 1112 hits
IPR003961	STR	DC_0003	633	712	InterPro cluster	Fibronectin type III	Central	High	Text match	998 proteins / 1603 hits
IPR003961	STR	DC_0003	730	809	InterPro cluster	Fibronectin type III	Central	High	Text match	998 proteins / 1603 hits
IPR057587	ATT	DC_0130	732	829	InterPro cluster	Tip attachment protein J, second Ig-like domain	Central	Medium	Text match	309 proteins / 309 hits
DC_0338	STR	DC_0338	1008	1086	Novel HMM	DC_0338	Central	Low	Positional only	38 proteins / 38 hits
DC_0338	STR	DC_0338	1081	1270	Novel HMM	DC_0338	Central	Low	Positional only	38 proteins / 38 hits
DC_1045	STR	DC_1045	1292	1389	Novel HMM	DC_1045	Central	Low	Positional only	12 proteins / 12 hits
G3DSA:2.60.120.260	STR	G3DSA:2.60.120.260	1391	1524	Merged direct domain	G3DSA:2.60.120.260	Central	Low	Positional only	264 proteins / 264 hits
IPR008979	STR	IPR008979	1406	1525	Merged direct domain	Galactose-binding-like domain superfamily	Central	Low	Positional only	24 proteins / 24 hits
DC_0338	STR	DC_0338	1428	1786	Novel HMM	DC_0338	Central	Low	Positional only	38 proteins / 38 hits
G3DSA:1.20.5.340	STR	G3DSA:1.20.5.340	1547	1618	Merged direct domain	G3DSA:1.20.5.340	Central	Low	Positional only	38 proteins / 38 hits
G3DSA:2.60.120.260	STR	G3DSA:2.60.120.260	1668	1797	Merged direct domain	G3DSA:2.60.120.260	Central	Low	Positional only	264 proteins / 264 hits
DC_2209	STR	DC_2209	1769	1844	Novel HMM	DC_2209	Central	Low	Positional only	15 proteins / 15 hits
DC_1278	STR	DC_1278	1835	2051	Novel HMM	DC_1278	Central	Low	Positional only	66 proteins / 66 hits
G3DSA:2.60.120.260	STR	G3DSA:2.60.120.260	1868	1988	Merged direct domain	G3DSA:2.60.120.260	Central	Low	Positional only	264 proteins / 264 hits
IPR008979	STR	IPR008979	1899	1988	Merged direct domain	Galactose-binding-like domain superfamily	Central	Low	Positional only	24 proteins / 24 hits
G3DSA:1.20.5.340	STR	G3DSA:1.20.5.340	2004	2066	Merged direct domain	G3DSA:1.20.5.340	Central	Low	Positional only	38 proteins / 38 hits
DC_0237	RBD	DC_0237	2098	2378	Novel HMM	DC_0237	C-terminal	Low	Positional only	10 proteins / 10 hits
G3DSA:1.20.5.340	STR	G3DSA:1.20.5.340	2222	2292	Merged direct domain	G3DSA:1.20.5.340	Central	Low	Positional only	38 proteins / 38 hits
IPR015406	RBD	DC_0135	2269	2380	InterPro cluster	Tip attachment protein J, central straight fiber domain	C-terminal	High	Text match	1265 proteins / 1266 hits

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Pseudomonas phage Lana [NCBI]	2530172	Uroviricota > Caudoviricetes > Lanavirus >
Host	Pseudomonas sp. [NCBI]	306	cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

No CDS data available.

Genome Context

Tertiary structure

PDB ID

240c8645dc3bc9dfe81394ce975245e43989f3b8d6e4ef3c96cf71f913924c50

ColabFold

Source ColabFold

Method ColabFold

Resolution 0,5781

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence