Protein

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Genbank accession
YP_009788871.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MASRLTTLDVVNACLATMGESPLNALDADHPYVQSALNAMSEASMTELSRGWWFNIDTVMLKPDAEHGFVYLPDDVLNVDTPASQLVQRGRRLYDSVNSTYDMTLALSAMQAAVIPAIVTRDVPFDDLPILAQHLISARTALQFQASYDGDSKRYQELGQHYQQMYNTIKAHDIRNRRVNMLTSPGVAEKLNRIRPLSTWTATSWRRNRV
Physico‐chemical
properties
protein length:210 AA
molecular weight: 23644,54490 Da
isoelectric point:6,18831
aromaticity:0,07619
hydropathy:-0,28905

Domains

Domains [InterPro]
IPR033767
TTP
8–177
IPR033767
IPR033767
TTP
8–185
IPR033767
YP_009788871.1
1 210
Architecture
TTP
TTP 8-185 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Ralstonia phage RS-PII-1
[NCBI] 		1932892 Uroviricota > Caudoviricetes > Autographivirales > Sukuvirus > Sukuvirus RSPII1
Host Ralstonia solanacearum
[NCBI] 		305 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009788871.1 [NCBI]
Genbank nucleotide accession
NC_047804 [NCBI]
CDS location
range 18931 -> 19563
strand -
CDS
ATGGCTTCTCGCCTTACAACGCTCGATGTGGTGAACGCCTGCCTCGCAACGATGGGCGAGAGTCCACTAAATGCCCTAGACGCCGACCATCCATACGTACAGTCGGCGCTGAACGCCATGTCCGAGGCCAGCATGACCGAGTTGAGTCGTGGATGGTGGTTCAACATCGACACCGTGATGCTCAAGCCGGACGCCGAGCACGGCTTTGTGTACCTGCCGGACGACGTGCTGAACGTGGACACCCCGGCCTCGCAACTAGTGCAGCGCGGACGCCGCCTGTACGACTCGGTGAACTCAACCTACGACATGACCCTCGCGCTGTCTGCCATGCAGGCAGCCGTCATCCCGGCGATTGTCACCCGCGACGTTCCTTTCGATGACCTGCCGATTCTGGCGCAGCACCTTATCTCGGCGCGCACGGCACTGCAATTCCAAGCCAGCTACGACGGCGACTCGAAGCGGTATCAGGAACTCGGTCAGCACTACCAGCAGATGTACAACACGATCAAGGCCCACGACATCCGCAACCGCAGAGTCAACATGCTGACCTCGCCCGGCGTGGCGGAGAAGCTGAACCGCATCCGCCCGCTCAGTACATGGACGGCGACTAGCTGGAGGAGGAACCGCGTATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
e5b1ee87965c6e33f86f6d1deae9a0caacae42524fbc31c2766187e0a42f9871
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9122
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation, Whole Genome Sequencing Analysis of a Novel Lytic Bacteriophage RS-PII-1 infecting Ralstonia solanacearum Su,J., Liu,J., Yu,H., Guo,Z., Sun,H., Fan,G., Gu,G. and Wang,G. 2017-09-19 — GenBank