Protein

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Genbank accession
YP_009784963.1 [GenBank]
Protein name
baseplate hub protein
RBP type
TSP
Evidence RBPdetect
Probability 0,82
Protein sequence
MKQILDSARNYLKNNSRIKTASLISLELPGSTGTSTAFIYLTDYFRDVIYNGILYQAGKVKSISSHKQNRDLSIGSLSFTITGTAQDEVLKLVQNGVSFLDRTVSIHQAIITEDGSILPVDPDTNGPLLYFRGRITGGGIKDNISTSGVGTSTITWNCSNQFYDFDRVNGRYTDDASHRGLEVVAGQLVPSNGAKRPEYQEDYGFFHANKSISILAKYQVQEERYKLKSKKKLFGLSRSYSLKKYYETVTKEVDIDFNLAAKYIPVVYGVQKIPGIPIFADTELHNPNIVYVVYAFAEGEIDGFLDFSFGDNPMICVDANDSSARTCFGTKKIVGDTMQRIASGISSSSPSVHGQEYRYNDGNGDIRIWTYHGKSNQTASDVLVNIARNRGFYLQNMNGNGPEYWDARYKLLDTAYAVVRFTINENRTEIPEVSAEIQGKKVKVYHSDGRVTANSTSLNGIWQTLDYLTSDRYGANITIDQFPLQQLIQEAAILDIIDESYQVSWQPYWRYVGWTNPLAENRQIVQMNTILDTSESVFKNVQGLLESYGGAINNLSGQYRVTVEKYSNTPLEINFLDTYGDLELSDTTGRNKFNSVQASIVDPALSWKTNSITFYNSNYKEQDKNLDKKLQLSFANITNYYTARSFADRELKKSRYSRTLSFSLPYQFIGIEPNDAIAFTYDRYGWDRKYFLVDEVENSREGKINVTLQEYGEDVFINSGQVDNSGNDIPDISNNVLPPRDFKYTPTPGGLVGSIGKNGELSWLPSLTNNVVYYSIVHSGHAEPYIVQQLETNPNERMIQEIIGEPAGLAIFEIRAVDINGRRSSPVTLSIELNSAKNLSVVSNFRVTNTASGDVTEFVGPDVKLAWDRIPEEDIIESIFYTLEIHDPQNRMLRSVRIENQYTYDYLLTYNKADFALQNSDALGINRKLYFRIRAEGDDGEQSVEWASI
Physico‐chemical
properties
protein length:949 AA
molecular weight: 106968,00760 Da
isoelectric point:5,21671
aromaticity:0,11170
hydropathy:-0,42645

Domains

Domains [InterPro]
DC_0187
STR
228–947
DC_0187
IPR032876
ATT
595–686
IPR032876
YP_009784963.1
1 949
Architecture
STR
ATT
STR
STR 228-594 | ATT 595-686 | STR 687-947 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009784963.1
1 949
Domain Start End Length (AA) Confidence
N-terminal 1 312 312 0,9326
Central domain 313 526 215 0,3799
C-terminal 527 949 422 0,0039
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-312
Central
313-526
C-terminal
527-949

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage DT571/2
[NCBI] 		1567007 Uroviricota > Caudoviricetes > Demerecviridae > Tequintavirus > Tequintavirus DT5712
Host Escherichia coli HS
[NCBI] 		331112 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Escherichia > Escherichia coli

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009784963.1 [NCBI]
Genbank nucleotide accession
NC_047749 [NCBI]
CDS location
range 78258 -> 81107
strand -
CDS
ATGAAACAAATACTAGATAGTGCTAGAAACTACTTAAAAAATAATAGCAGAATAAAAACTGCTAGTCTAATTTCCCTAGAGTTACCTGGCTCTACTGGTACTAGTACTGCTTTTATTTATTTAACTGATTATTTTAGGGATGTAATATATAATGGCATCCTATACCAGGCAGGTAAAGTTAAGTCTATTAGCTCACACAAACAAAACAGAGATTTATCTATTGGCAGTCTATCTTTTACCATTACTGGCACAGCACAGGATGAAGTGCTAAAACTAGTACAAAATGGCGTGTCCTTCTTAGATAGAACCGTATCAATTCATCAAGCAATTATTACTGAAGATGGTTCTATTCTGCCAGTAGACCCAGATACAAATGGTCCTTTACTGTACTTTAGGGGAAGGATTACTGGAGGAGGCATTAAAGATAACATTAGTACCTCTGGAGTAGGAACTTCTACAATTACCTGGAATTGTTCTAACCAATTCTATGACTTTGATAGGGTTAATGGCAGATATACTGATGATGCTTCTCATAGGGGGCTTGAAGTTGTAGCTGGACAGCTAGTACCATCTAACGGTGCTAAAAGACCTGAGTACCAAGAAGACTATGGGTTCTTTCATGCTAATAAAAGTATATCTATACTGGCAAAGTACCAAGTACAGGAAGAAAGATACAAGCTAAAATCAAAGAAAAAATTATTTGGTTTATCTAGAAGCTACAGCCTTAAAAAATACTATGAAACTGTTACTAAGGAAGTAGATATAGATTTTAACCTTGCTGCTAAATATATACCAGTAGTTTATGGTGTACAGAAAATACCGGGGATACCTATTTTTGCTGATACAGAACTACACAATCCCAACATAGTTTATGTCGTATACGCCTTTGCTGAGGGGGAGATTGATGGTTTTCTTGATTTCTCCTTCGGTGATAATCCTATGATCTGTGTAGACGCTAATGATAGCTCCGCTAGAACCTGCTTCGGTACTAAAAAAATAGTAGGAGATACCATGCAGCGGATAGCATCTGGAATTTCCTCTAGTAGTCCATCCGTTCATGGTCAAGAGTATAGGTATAATGATGGAAATGGTGATATAAGGATCTGGACTTACCACGGAAAGTCTAATCAAACAGCCTCTGATGTGCTAGTGAACATCGCTAGAAACCGCGGGTTCTATCTTCAAAATATGAATGGCAATGGGCCTGAATACTGGGATGCTAGATATAAGCTACTAGATACTGCTTATGCCGTAGTGCGTTTTACTATTAATGAAAACAGAACTGAGATTCCAGAAGTTAGTGCTGAAATTCAAGGTAAAAAAGTAAAAGTCTATCATTCTGATGGTAGAGTAACTGCTAATAGTACTAGTTTAAATGGTATTTGGCAAACACTTGATTACTTAACCTCTGATAGATACGGCGCTAATATTACCATTGATCAGTTCCCCCTTCAGCAATTAATACAGGAAGCAGCTATTTTAGATATTATAGATGAATCCTATCAGGTATCTTGGCAGCCATATTGGAGATACGTTGGGTGGACTAATCCATTAGCGGAAAATAGACAAATAGTACAAATGAATACTATTCTGGATACATCTGAATCAGTATTTAAAAATGTGCAAGGTTTATTAGAGTCCTATGGTGGGGCTATTAACAACTTATCTGGCCAGTATAGGGTTACTGTAGAAAAATACTCTAATACTCCGTTAGAGATTAATTTTCTAGATACTTATGGCGATTTGGAGCTATCAGATACTACTGGTAGAAATAAATTCAACTCAGTTCAAGCATCTATAGTAGATCCAGCCCTTAGCTGGAAAACTAATTCCATTACATTCTATAACTCCAATTATAAGGAACAGGACAAGAACCTAGATAAAAAATTACAACTATCTTTTGCTAATATTACTAATTACTATACTGCAAGAAGTTTTGCTGATAGAGAACTTAAGAAATCCAGATACTCAAGAACACTTTCTTTCTCATTGCCGTATCAATTCATTGGTATTGAACCTAACGATGCTATTGCATTCACATATGACCGTTATGGGTGGGATAGGAAGTACTTCCTAGTAGACGAAGTGGAAAACTCTAGAGAAGGTAAGATAAATGTTACCTTACAGGAGTATGGAGAAGATGTATTCATCAACTCTGGGCAGGTTGATAATAGCGGTAATGATATCCCCGATATTAGTAATAATGTCCTTCCTCCTAGAGACTTTAAATATACTCCTACTCCTGGCGGTTTAGTAGGCTCTATAGGTAAAAATGGTGAGTTATCCTGGCTTCCGAGTCTAACCAATAATGTAGTTTACTACTCTATTGTGCACTCAGGCCATGCCGAACCTTACATAGTACAACAGTTAGAGACCAACCCTAACGAACGTATGATCCAAGAAATAATTGGGGAACCAGCAGGTCTGGCTATATTTGAGATAAGGGCAGTAGATATTAACGGTAGAAGAAGTTCTCCGGTGACTCTGTCCATAGAACTTAACTCCGCTAAAAACCTTAGTGTAGTATCTAATTTTAGGGTAACTAATACTGCCTCTGGAGATGTAACTGAGTTTGTTGGCCCAGATGTGAAACTAGCCTGGGATAGAATACCTGAAGAAGATATAATAGAGAGTATATTTTATACCCTTGAAATACACGATCCACAAAATAGGATGTTAAGAAGTGTACGTATTGAAAATCAGTATACTTATGACTATTTATTAACATATAATAAGGCAGACTTTGCTCTCCAGAACAGTGATGCTCTAGGTATAAATAGAAAATTGTATTTTCGTATTAGAGCTGAAGGGGATGATGGAGAACAGTCTGTGGAGTGGGCATCCATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6c1c83422868b24ca549fa6f5da517e7a59e9eeb73786c40cd9d23ead10b2cf0
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2752
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50