Protein

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Genbank accession
YP_010670599.1 [GenBank]
Protein name
tail collar fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,82
Protein sequence
MAITFPNTPSPGDQYVAENGYTYEYDGEKWSTLPDSEGQIPAGGTTGQFLAKVNNTDYNMEWTDAAPPTSIGTTPPTGDLEDGQLWWRSDTGVLYIYYGDGDSSQWVQAAVGMDTRVQAEVYTGDVPPLGPGEGDLWWNTTDTNLYVYYQSVWVQSNPVPPEQPNYWQRDAATGVVSPSTDGDVLNGIASINGGHAGPNNLIINGAMQVRQRTADIAVSQGLDQTTQGPIDRFRLRHHGDQWAGTLSRGTESVNNEFQHYWRLTTTTPETAVDGVNQLIVEQLFEGYNVAHLNYGNSPAKSLTLSFWVRSSEAGTYIAKLYSLDANRLITKVYTIDSADTWEQKTFVFEGDAAGTIGNNESEGLRVCWQIAAGTDFVSGSTPTTWTAYSNTTWAAGHVQNGVMTNTNATFDLTGVQLTATDTPVAFQHEDYGTTLQKCQRYFIRKTTASDYRVSILRSNSSSSSTVMSLPVQMRTTPTASVVTQPNVKSIRRLDDVNGTNYTNLTVDPRNNLEYSFTVDSAFTEVSQMLVFNAIFDLDAEL
Physico‐chemical
properties
protein length:541 AA
molecular weight: 59436,40150 Da
isoelectric point:4,41653
aromaticity:0,10536
hydropathy:-0,45157

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-H34
[NCBI] 		2718942 Uroviricota > Caudoviricetes > Pantevenvirales > Makaravirus > Makaravirus thirtyfour
Host Synechococcus sp. MW02
[NCBI] 		1620844 Cyanobacteriota > Cyanophyceae > Synechococcales > Synechococcaceae > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010670599.1 [NCBI]
Genbank nucleotide accession
NC_070965 [NCBI]
CDS location
range 65733 -> 67358
strand -
CDS
ATGGCTATTACCTTCCCCAATACTCCATCACCTGGAGATCAATATGTAGCCGAGAACGGTTATACTTACGAGTATGACGGTGAGAAGTGGTCCACTCTGCCTGACAGTGAGGGCCAAATTCCTGCTGGTGGTACTACTGGTCAGTTCCTTGCTAAGGTAAACAACACTGACTATAACATGGAGTGGACTGATGCCGCTCCTCCTACCTCTATTGGTACCACTCCACCAACTGGGGACCTAGAAGACGGTCAGTTGTGGTGGCGTAGTGACACTGGTGTCCTTTATATTTACTACGGTGACGGCGACTCCTCCCAGTGGGTCCAGGCTGCTGTGGGTATGGATACTCGTGTCCAGGCTGAAGTTTATACCGGTGATGTTCCACCTCTGGGTCCAGGGGAAGGTGACCTGTGGTGGAACACTACCGATACCAACCTCTACGTCTATTACCAGAGCGTCTGGGTGCAGTCTAACCCTGTTCCCCCAGAGCAACCCAACTACTGGCAGAGAGACGCCGCTACGGGCGTCGTAAGCCCCTCTACGGATGGTGACGTCCTTAACGGCATTGCTTCTATTAACGGTGGCCATGCTGGTCCCAATAACCTCATCATCAACGGTGCCATGCAGGTCAGACAACGCACTGCTGATATTGCTGTCAGTCAAGGACTCGATCAAACAACACAGGGTCCAATTGACCGTTTTAGGTTAAGACATCATGGAGACCAATGGGCAGGAACTCTTTCTCGTGGTACCGAAAGCGTCAACAACGAATTTCAACACTACTGGAGATTAACAACAACGACTCCAGAGACAGCCGTAGACGGCGTAAACCAACTTATTGTAGAACAACTCTTTGAAGGATACAATGTTGCACATCTGAATTATGGTAATAGCCCAGCTAAATCATTAACACTTAGTTTTTGGGTTAGATCTTCTGAAGCTGGTACTTACATTGCTAAACTATATTCCCTCGACGCCAACAGGTTAATCACTAAAGTTTACACTATTGATTCTGCCGACACCTGGGAACAAAAAACTTTTGTGTTTGAGGGTGATGCTGCTGGTACTATTGGTAATAATGAGAGTGAAGGTTTACGAGTTTGTTGGCAGATTGCTGCAGGTACTGATTTTGTATCTGGTTCAACTCCAACAACATGGACTGCTTATTCTAACACAACCTGGGCCGCGGGGCACGTTCAGAATGGTGTTATGACTAATACTAATGCAACCTTTGACTTGACTGGTGTCCAACTAACCGCCACCGATACTCCTGTTGCCTTCCAACACGAAGACTACGGTACCACTCTCCAGAAGTGTCAGAGGTATTTCATACGCAAAACGACCGCATCAGATTACAGGGTTTCCATTCTCAGAAGCAACAGCAGTAGCAGCTCAACGGTAATGTCTTTACCTGTCCAGATGAGGACAACCCCAACGGCATCAGTAGTCACTCAACCAAACGTCAAATCGATTAGACGACTAGACGACGTTAACGGAACGAATTATACCAATCTAACTGTCGATCCGAGGAACAATTTGGAATATAGTTTTACTGTAGATTCTGCTTTCACCGAGGTTTCTCAAATGCTTGTGTTTAATGCAATCTTCGATCTCGACGCCGAACTCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
c2deabcb285da74d54def78e9182702ae4ce9396b9d6ab6e5b10107d620c6f1b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8420
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Isolation and Genome Sequence of a Novel Cyanophage S-H34 from the Huanghai Sea, China Jiang,T. 2019-04-04 — GenBank