Protein

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Genbank accession
UOK17020.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MIRLNDSLSTSTQERVAVLDAKTLEVLFQAASPMRVSVKESKRATKFAVEDGTERSDHVVRELIEVQIDFVLTADVRNAFQSLRQAHEQNKLVSVQTKVRLYENLLITDIPHDETPEFGMAIAVPVRLQEFLQVKPEYGTLPPEKVAKKNQSSTVQRGQQTGSEREESSILGRGARGARKWFS
Physico‐chemical
properties
protein length:183 AA
molecular weight: 20607,13220 Da
isoelectric point:7,99081
aromaticity:0,05464
hydropathy:-0,47104

Domains

Domains [InterPro]
DC_0601
STR
3–181
DC_0601
IPR048494
ATT
36–142
IPR048494
UOK17020.1
1 183
Architecture
STR
ATT
STR
STR 3-35 | ATT 36-142 | STR 143-181 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Bordetella phage vB_BaM-IFTN1
[NCBI] 		2928717 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Bordetella avium
[NCBI] 		521 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UOK17020.1 [NCBI]
Genbank nucleotide accession
OM293950.1 [NCBI]
CDS location
range 13900 -> 14451
strand +
CDS
ATGATCCGACTGAATGACTCCTTATCGACCTCAACGCAAGAGCGAGTTGCGGTGTTGGATGCCAAGACGTTAGAGGTGCTGTTTCAGGCCGCCTCTCCTATGAGGGTGTCCGTCAAAGAGAGCAAGCGCGCCACAAAGTTTGCCGTTGAGGATGGCACGGAACGATCAGATCATGTTGTTCGTGAGCTGATCGAGGTGCAGATCGACTTTGTTCTGACGGCTGATGTCCGCAATGCTTTTCAGTCGCTGCGACAAGCGCACGAGCAAAACAAGCTGGTGTCGGTGCAGACCAAAGTCCGGCTATACGAAAACCTGCTGATTACCGACATACCGCACGACGAGACGCCGGAGTTTGGGATGGCTATCGCTGTGCCGGTCAGACTTCAGGAGTTTTTGCAGGTGAAGCCAGAGTACGGGACTTTGCCGCCTGAAAAGGTGGCGAAGAAGAACCAGTCGAGCACGGTGCAGCGCGGGCAGCAGACGGGCAGCGAGAGGGAAGAAAGCAGTATTTTGGGACGTGGCGCGAGGGGGGCGCGGAAATGGTTCAGCTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
165be98b1e3c8a49b958f2410eaabbe738657f277f8956fffa0d886bbba3e4e8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7948
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of Bordetella avium bacteriophages Serian,D., Churin,Y., Kehrenberg,C. and Hammerl,J.A. 2023-06-15 — GenBank