Protein

View in Explore
Genbank accession
QGZ14132.1 [GenBank]
Protein name
tail fiber protein host specificity
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,63
Protein sequence
MTLPTIGPISLDDIATEFSLSLPVSMTDLYGIAVGIPSTGEISLSMFRGKGINIEKIVMTSTQNLVLSSLFTNEELASPLDKRVFIDPGVSIGSLNSALPALRSGIFLGNLTIENYGSIAGAGGLGGTNGSPGTDGGDAIVLDIPGVVIENYGYIRGGGGGGGSGGIGGKGGNGVYSFVRREPKTGSAFSKTDPKFYVYEYRFNGVLGNVQWFWDGVQVANAFSNDFVQVGSIKYFKGDQRSYQKKENVGSVQEYTFYSIHQEYPISYGTDGGLGGDYKGTFSDGGQGQGYLRSLSKGNQGLIGEPGGTNAGHGGDGGHGGDGGTWGIPGNPGTAGQNGTDGNISAGTIGQNGSPGGNAGRAVTSSQIYTVNNSGTIDGSY
Physico‐chemical
properties
protein length:381 AA
molecular weight: 38994,42050 Da
isoelectric point:4,86146
aromaticity:0,09449
hydropathy:-0,24226

Domains

Domains [InterPro]
DC_1679
STR
1–208
DC_1679
IPR007932
RBD
111–167
IPR007932 DC_0422
QGZ14132.1
1 381
Architecture
STR
RBD
STR 1-208 | RBD 209-381
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RL2RES
[NCBI] 		103371 Uroviricota > Caudoviricetes > Pootjesviridae > Innesvirus RL2RES >
Host Rhizobium leguminosarum
[NCBI] 		384 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Hyphomicrobiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QGZ14132.1 [NCBI]
Genbank nucleotide accession
MN549361.1 [NCBI]
CDS location
range 130362 -> 131507
strand -
CDS
GTGACTCTTCCGACAATCGGACCAATCTCTCTAGACGATATCGCTACAGAGTTCAGTCTTTCGCTTCCAGTAAGCATGACTGATCTGTACGGTATCGCCGTCGGTATTCCGTCCACAGGTGAGATCTCTCTGAGCATGTTCAGAGGCAAAGGCATCAACATCGAGAAGATAGTGATGACTTCGACACAGAACCTTGTTCTGTCGTCTCTGTTCACGAACGAAGAGCTCGCTTCTCCTCTAGACAAGCGAGTGTTCATCGATCCAGGTGTTTCGATCGGATCTCTCAATTCTGCTCTTCCGGCTCTTCGATCAGGGATCTTTCTTGGAAACCTCACAATCGAGAACTACGGAAGCATCGCAGGTGCTGGCGGTTTAGGCGGAACTAACGGTTCTCCTGGAACAGACGGAGGAGACGCTATCGTCCTTGACATTCCTGGTGTCGTCATTGAAAACTACGGCTACATCCGTGGTGGAGGTGGAGGCGGCGGATCCGGTGGTATAGGAGGCAAAGGCGGCAACGGAGTGTACTCTTTCGTTAGGAGAGAACCTAAAACCGGAAGCGCTTTCTCTAAGACAGATCCGAAGTTCTACGTATACGAATATCGCTTCAACGGCGTTCTCGGTAATGTCCAGTGGTTCTGGGATGGAGTTCAAGTCGCTAACGCATTTTCCAACGACTTCGTCCAAGTCGGTTCAATCAAGTACTTCAAAGGTGATCAGCGCTCTTATCAGAAGAAGGAAAACGTCGGTTCAGTCCAGGAATACACCTTCTACTCGATTCATCAAGAGTACCCGATCTCATACGGTACTGACGGCGGACTCGGTGGTGACTACAAAGGCACGTTCTCTGACGGTGGTCAAGGACAAGGATATCTTCGCTCTCTGTCGAAAGGCAACCAAGGTCTCATCGGCGAACCTGGCGGAACGAATGCTGGTCACGGTGGAGACGGAGGTCACGGTGGAGATGGTGGCACATGGGGCATTCCTGGTAATCCTGGCACTGCTGGACAAAACGGCACAGACGGAAACATCTCAGCTGGTACTATCGGACAGAACGGTTCTCCAGGCGGAAACGCAGGTAGAGCTGTCACTTCGTCGCAAATATACACTGTAAACAATTCTGGCACGATCGATGGAAGTTACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
67a5fe5a8b9a8f5e19764314d59eb40c9ab0af5c83413a1b4a7e60ed28a9c43b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6935
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of bacteriophage vB_RLeM_RL2RES Gunathilake,D., Bhat,S., Yost,C.K. and Hynes,M.F. 2022-09-15 — GenBank