Protein

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Genbank accession
YP_001111102.1 [GenBank]
Protein name
gp23
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MPAGFQAFTDTGVYQIDGRTPNYQMVQSMVADSAVGSLPLARNDAGRTFMIDLPSVTFTFSSVAGPMYAVLASGAVGITLWGAKRNGSSYSVTFVTERPCNVRLFVFDQVPVAAGNFGLQVFDAGGRLVADSSKPFLRVLDVIFEDYMNGVGWTVEGAPSPPWHSRSYGVPVLISAIYSVHRAWSYDPGVVELSSIRVDGGNVSWGTALYNGGRTPNIACFREQYHSRFMVLDGTGIV
Physico‐chemical
properties
protein length:238 AA
molecular weight: 25657,76380 Da
isoelectric point:5,86973
aromaticity:0,12185
hydropathy:0,13697

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_001111102.1
1 238
Domain Start End Length (AA) Confidence
N-terminal 1 15 15 0,9617
Central domain 16 214 200 0,0027
C-terminal 215 238 23 0,9979
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-15
Central
16-214
C-terminal
215-238

Taxonomy

  Name Taxonomy ID Lineage
Phage Burkholderia phage phi644-2
[NCBI] 		2881400 Uroviricota > Caudoviricetes > Stanholtvirus >
Host Burkholderia pseudomallei
[NCBI] 		28450 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_001111102.1 [NCBI]
Genbank nucleotide accession
NC_009235 [NCBI]
CDS location
range 20743 -> 21459
strand +
CDS
ATGCCGGCAGGATTTCAGGCATTCACTGATACCGGTGTGTATCAGATCGACGGGCGAACGCCGAACTACCAGATGGTCCAATCGATGGTGGCGGATTCTGCGGTCGGTTCGTTGCCTTTGGCACGGAATGATGCTGGGCGGACGTTCATGATAGATCTTCCGAGTGTCACTTTCACTTTCTCGTCAGTGGCGGGTCCGATGTACGCGGTACTCGCATCTGGCGCAGTGGGAATCACGCTGTGGGGTGCGAAGCGAAACGGAAGTTCGTATTCCGTGACGTTTGTCACCGAGCGACCATGTAACGTCCGACTGTTCGTGTTCGACCAAGTACCCGTCGCCGCGGGAAACTTCGGGTTGCAGGTTTTCGATGCTGGCGGACGATTGGTCGCGGATTCGTCGAAGCCGTTTCTCCGGGTCCTCGATGTGATCTTCGAGGATTACATGAACGGTGTTGGGTGGACAGTCGAGGGCGCACCTTCGCCGCCGTGGCATTCTCGGTCGTACGGCGTGCCAGTTCTGATTTCCGCCATCTACTCCGTTCATCGAGCGTGGAGCTATGACCCGGGGGTGGTTGAGCTCTCGTCGATTCGCGTTGACGGTGGGAATGTGTCTTGGGGAACGGCGCTGTACAACGGTGGGAGAACGCCGAATATCGCATGCTTTCGCGAGCAGTATCACTCGCGATTCATGGTGCTTGACGGGACGGGAATCGTTTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
ca23186bb06c8dfbc45f423912f8cbebc555b8663b3f46000faa0be0cdd4949f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8166
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50