Protein

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Genbank accession
QKN88272.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MTLDHDAIKKAYPNATKIDDGEGVFDITGKEIVIDNSLVTAARTTLDNEASAILYQRQRTGIDGTTDTIYPDLGEQFDLLFKDIAAGTLTTSGNLYTALKAVKDKYPKPS
Physico‐chemical
properties
protein length:110 AA
molecular weight: 11956,24630 Da
isoelectric point:4,67543
aromaticity:0,07273
hydropathy:-0,35909

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Prochlorococcus phage P-HS2
[NCBI] 		2740745 No lineage information
Host Prochlorococcus marinus subsp. pastoris str. CCMP1986
[NCBI] 		59919 Bacteria > Cyanobacteria > Prochlorales > Prochlorococcaceae > Prochlorococcus > Prochlorococcus marinus

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QKN88272.1 [NCBI]
Genbank nucleotide accession
MT490303.1 [NCBI]
CDS location
range 2331 -> 2663
strand +
CDS
ATGACTTTAGACCATGATGCAATAAAAAAAGCATATCCTAACGCCACAAAAATTGATGATGGCGAAGGTGTTTTTGATATTACAGGTAAGGAAATCGTAATTGATAATAGTCTTGTCACTGCTGCAAGAACAACTTTAGATAATGAAGCCTCTGCAATTCTTTACCAACGTCAAAGAACAGGGATTGATGGGACAACAGACACAATTTATCCTGATCTCGGTGAACAATTTGATTTACTATTTAAAGACATCGCTGCGGGTACTTTGACAACCTCTGGAAATCTATACACAGCCCTAAAAGCCGTAAAAGACAAATATCCAAAACCAAGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ee2bfe3ac711ec4940605ccc06b979db4ac61db36bb7d8e2d69dfcdb7e75f83b
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9627
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Frequency of mispackaging of Prochlorococcus DNA by cyanophage Laurenceau,R., Raho,N., Forget,M., Arellano,A. and Chisholm,S.W. 2020 — GenBank