Protein

View in Explore
Genbank accession
YP_010094170.1 [GenBank]
Protein name
hinge connector of long tail fiber protein distal connector
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
Protein sequence
MADLKLGSTAGGSVLWHQGNFPLTPVSNDLLYKTYKVYTEYNKPQAVDNDFVSKANGGNYKNNVYFEKGLTFNDTNGYGIKLGARTGGAPFTASFRIKGAFGYETEDGTPFVIFDPSKVVGAKRLTVMGDSLFRQVYDESGRVFSPGNTPTKAQVGLSLVDNAKQVQINNTDMQIMDGVLAAPNFISRNPASGAGHVPRFDQIVQKDSIQDFGYY
Physico‐chemical
properties
protein length:215 AA
molecular weight: 23436,94690 Da
isoelectric point:7,82016
aromaticity:0,12093
hydropathy:-0,37814

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010094170.1
1 215
Domain Start End Length (AA) Confidence
N-terminal 1 126 126 0,4222
Central domain 127 204 79 0,1976
C-terminal 205 215 10 0,3703
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-126
Central
127-204
C-terminal
205-215

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterobacteria phage vB_EcoM_IME281
[NCBI] 		2163887 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Dhakavirus
Host Escherichia coli BL21(DE3)
[NCBI] 		469008 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010094170.1 [NCBI]
Genbank nucleotide accession
NC_055740 [NCBI]
CDS location
range 15924 -> 16571
strand -
CDS
ATGGCAGATTTAAAATTAGGTTCTACAGCAGGAGGTTCGGTATTATGGCACCAAGGTAATTTCCCCTTAACGCCTGTATCAAATGACCTTCTTTACAAAACATATAAAGTTTACACCGAGTATAATAAACCTCAAGCAGTTGATAACGATTTCGTTTCAAAAGCTAACGGCGGTAATTATAAGAACAACGTGTATTTTGAAAAAGGTTTGACCTTTAATGATACTAATGGATATGGTATTAAATTAGGAGCAAGAACCGGCGGGGCTCCGTTCACAGCTTCTTTCCGTATTAAAGGTGCTTTTGGATATGAAACGGAAGATGGTACTCCGTTTGTGATATTTGACCCAAGTAAAGTAGTGGGTGCTAAACGTCTTACCGTAATGGGTGATTCATTATTCCGCCAAGTATATGATGAATCGGGCCGCGTATTCAGCCCTGGCAACACCCCTACTAAGGCCCAAGTTGGATTGTCATTAGTAGATAACGCAAAACAGGTCCAAATAAATAATACTGACATGCAAATAATGGATGGAGTGCTAGCGGCTCCTAACTTTATTTCACGGAATCCGGCCTCTGGTGCAGGACACGTTCCTCGCTTTGACCAGATTGTTCAAAAAGATTCTATTCAAGATTTTGGTTATTATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8c2df412c47ae95e02eb7002679bf97307dc14d9de0a8217e9898f1c6d0940d9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5784
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence analysis of Enterobacteria phage IME281 Li,P., Wang,J. and Tong,Y. 2016-02-25 — GenBank