Protein

View in Explore
Genbank accession
XEN39396.1 [GenBank]
Protein name
tail fiber protein host specificity
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MAVVGIPGNIGSSAKAETGQAWMSAAAVQLRLPGSDVWMSQFAGRSKEEIWEWGGANHSFNKDWLIGELRNRGGTPVVINIRADQVSYTPGVPLFEFPGDLPNAYITLNIYATIYGRGGNGSNGSSGGGGGGDCIHNWIGTRLRINNQGWICGGGGGGGGLQINGDPSQGGGGGRPFGLGGTNGYNLNGTNASILSPGAGYNNGYGDVAGNGGDVGNGGGAAHSGTGFYQTAPAGGAGRAVVGTSPQWIATGSIAGSWL
Physico‐chemical
properties
protein length:259 AA
molecular weight: 25901,09450 Da
isoelectric point:6,26703
aromaticity:0,08880
hydropathy:-0,23629

Domains

Domains [InterPro]
IPR048291
ATT
1–43
IPR048291 IPR007932
DC_1679
STR
6–165
DC_1679
XEN39396.1
1 259
Architecture
ATT
STR
RBD
ATT 1-43 | STR 44-165 | RBD 166-259
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage BP13076
[NCBI] 		3241510 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica
[NCBI] 		28901 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XEN39396.1 [NCBI]
Genbank nucleotide accession
PQ118624.1 [NCBI]
CDS location
range 94906 -> 95685
strand +
CDS
ATGGCAGTTGTAGGAATTCCAGGAAATATAGGGTCATCCGCTAAAGCAGAAACTGGTCAAGCATGGATGTCAGCAGCAGCAGTACAATTAAGATTGCCTGGTTCCGATGTATGGATGTCACAATTTGCTGGTCGTTCTAAGGAAGAAATCTGGGAATGGGGCGGAGCAAATCATAGTTTTAATAAAGATTGGTTAATAGGAGAACTTCGCAATAGAGGCGGTACTCCAGTAGTAATTAATATAAGAGCGGACCAAGTATCTTATACGCCAGGTGTTCCATTATTTGAATTTCCGGGAGACCTTCCAAACGCTTATATTACGCTCAACATTTATGCTACTATATATGGAAGAGGCGGTAATGGTAGTAATGGTTCTTCCGGCGGCGGTGGTGGCGGTGATTGTATCCATAACTGGATAGGAACTAGACTTAGAATAAACAATCAAGGCTGGATTTGTGGAGGCGGCGGTGGTGGCGGTGGTCTGCAAATCAACGGAGACCCGTCACAAGGCGGCGGTGGCGGCCGACCGTTTGGTCTAGGCGGAACAAACGGATACAATTTGAACGGTACTAATGCATCTATTCTTTCTCCGGGCGCAGGATATAATAACGGATACGGGGACGTCGCGGGTAATGGTGGCGATGTAGGTAATGGTGGCGGCGCCGCGCATTCTGGAACAGGATTTTATCAAACAGCTCCGGCGGGAGGAGCAGGAAGAGCAGTTGTTGGAACATCGCCGCAGTGGATAGCTACCGGTTCGATTGCTGGCTCTTGGTTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b1eef78612486edb85ae6ffb09d58abe6a4db06bdb496ef991d186462d58f7ce
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9105
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50