Protein

Genbank accession
ASD52214.1 [GenBank]
Protein name
tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,57
Protein sequence
MGLVSQSVKNLKGGISQQPDILRFPNQGAFQENGWSSETQGLQKRPPTVFVKKLADQGSFGGQPLIHMINRDAVEQYDVVFTGTSLRVFGLDGKEYAVRGYDGYANTSQPRKDLRMITVADYTFVTNKIKVTDMGKTMTHAGAKPLGQRCVVNVRGGQYGRTLKFGINGSDSDAVLGMPAGDVADYPSPPPGTPAKQVEWTDAGFIAREMAKRFDATMTAAGKPYRATAGQGWIVIDANGGPDITSVKTDDGYAGQLLNAFLYQVQAFNKLPSQCVDGYLVEITGEAARSGDNYWVQYSASGLVWKEVAKPGIIAGLDKTTMPRALVRAADGNFDWKVLDWVERKSGDDDTNPMPSFIGAPINEIFFFRNRLGFLSGENVIMSRTSKYFNFFPSSVAQVSDDDPIDVAISHNRVSILKYAVPFSEQLLLWSDQAQFVLSSAGTMTSKSIQLDLTTEFDVSDGARPYGIGRGVYFAAPRASYTSIKRYYAVQDVSDVKSAEDISAHIPSYIKNEVFSIHGSGTENFVAILSDGDPSKVFIYKFLYLNEDLAQQSWSHWTFGDDTKVLSATCIGSYMHVILERPSGITLERIEFTANTVDLPMEPYRAYMDMKVEASVEPFNEDLYVTTIDVPSIYGGVLGTNVVLYTLDQHGVLERHEAPPRGWIAGSKIELVGDRSGEKFVVGREYTFHYEFSKFLIKQTADDGSTSTEDIGRLQLRKAWLNYEQSGAFEVNVYNGSTEYVYNMAGGRLGTELILGSFTLGTGQFRFPVAGNALRQQVSIVSSNPNPLNVIGCGWEGNYIRRSSGI
Physico‐chemical
properties
protein length:806 AA
molecular weight: 88664,70670 Da
isoelectric point:5,39416
aromaticity:0,11042
hydropathy:-0,25062

Domains

Domains [InterPro]
IPR058003
1–806
IPR058003
ASD52214.1
1 806
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage PspYZU08
[NCBI] 		1983557 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ASD52214.1 [NCBI]
Genbank nucleotide accession
KY971611 [NCBI]
CDS location
range 24896 -> 27316
strand +
CDS
ATGGGACTTGTTTCACAAAGCGTTAAGAACCTCAAAGGCGGGATCAGTCAGCAACCTGACATCCTGAGGTTTCCCAATCAGGGCGCCTTTCAGGAGAACGGCTGGTCCTCTGAGACCCAAGGGTTACAGAAGCGACCGCCCACGGTGTTCGTTAAGAAGCTCGCTGACCAAGGATCTTTCGGTGGTCAACCGCTGATCCACATGATCAACCGGGACGCCGTAGAGCAATACGATGTGGTGTTCACTGGGACCTCTTTGAGGGTCTTCGGGTTGGACGGTAAGGAGTACGCGGTGCGTGGCTATGACGGCTACGCGAACACTTCACAGCCTCGTAAGGATCTGCGGATGATCACAGTGGCCGACTACACGTTCGTGACCAACAAGATCAAGGTAACGGATATGGGCAAGACCATGACGCATGCCGGGGCCAAGCCTCTGGGCCAGCGCTGTGTAGTCAACGTGCGTGGTGGTCAGTATGGTCGCACCTTGAAGTTCGGCATCAACGGCTCAGACTCTGACGCTGTTCTGGGCATGCCTGCTGGTGATGTCGCTGACTACCCAAGTCCACCACCGGGAACACCAGCCAAACAGGTTGAGTGGACCGATGCGGGCTTTATTGCTCGTGAGATGGCTAAGCGGTTCGATGCAACCATGACGGCTGCGGGTAAGCCTTACAGGGCCACTGCGGGGCAAGGCTGGATTGTGATCGACGCGAATGGCGGTCCTGACATCACTTCGGTGAAGACAGATGACGGCTACGCTGGGCAGTTGCTCAATGCGTTCCTCTATCAGGTCCAAGCGTTCAACAAGCTGCCATCACAATGTGTCGATGGGTATCTCGTGGAGATCACTGGGGAAGCTGCACGCTCTGGTGATAACTACTGGGTTCAGTACAGCGCCTCAGGGCTCGTCTGGAAGGAGGTAGCCAAACCGGGTATCATTGCGGGGCTCGACAAGACAACGATGCCAAGAGCGCTTGTGAGAGCTGCTGACGGCAACTTCGACTGGAAGGTCCTCGACTGGGTTGAACGTAAGTCAGGTGATGATGACACCAACCCGATGCCCAGCTTTATTGGAGCGCCTATCAACGAGATCTTCTTCTTCCGCAACCGTTTGGGTTTCCTCTCAGGCGAAAACGTGATCATGTCGAGGACCTCGAAGTACTTCAACTTCTTCCCTTCGAGCGTGGCTCAGGTCTCCGACGATGACCCTATCGACGTGGCGATCTCCCACAACCGTGTGTCGATCTTGAAGTACGCTGTTCCGTTCTCTGAGCAGCTCTTGCTGTGGTCTGACCAAGCTCAGTTCGTTCTCTCGTCTGCGGGCACGATGACTTCCAAAAGCATCCAGCTCGACCTGACCACTGAGTTCGATGTGAGCGACGGTGCTCGACCATACGGAATTGGACGTGGTGTTTATTTCGCTGCTCCTCGTGCCAGCTACACCAGCATCAAGCGGTACTACGCGGTACAGGACGTGAGCGATGTGAAGTCCGCTGAGGACATCTCTGCGCACATTCCGAGCTACATCAAGAACGAGGTCTTCTCGATCCATGGGTCGGGCACTGAGAACTTCGTAGCGATCCTCTCTGACGGTGATCCTTCCAAGGTGTTCATCTACAAGTTCCTGTACCTCAACGAGGACTTGGCGCAACAGAGCTGGAGCCATTGGACGTTTGGTGATGACACTAAGGTACTCTCTGCGACCTGCATTGGATCGTACATGCACGTTATCCTTGAGAGACCCTCTGGCATCACGCTGGAGCGTATTGAGTTCACAGCCAACACCGTGGATCTCCCAATGGAGCCCTACCGTGCCTACATGGACATGAAGGTTGAAGCGAGTGTTGAGCCTTTCAACGAGGACCTATACGTGACCACAATTGACGTTCCGTCGATCTATGGCGGTGTGCTGGGGACCAATGTTGTGCTGTACACGCTGGATCAACATGGTGTCCTTGAGAGACATGAGGCACCGCCTCGTGGCTGGATCGCTGGCTCCAAGATTGAACTCGTGGGTGATCGCTCTGGAGAGAAGTTCGTGGTTGGTCGGGAGTACACGTTCCACTATGAGTTCTCGAAGTTCCTCATCAAGCAAACCGCTGATGACGGCTCGACCAGCACTGAGGACATTGGACGGTTGCAGTTGCGCAAAGCGTGGCTGAACTACGAACAGTCTGGTGCCTTCGAGGTCAACGTGTACAACGGCTCAACCGAGTACGTGTACAACATGGCCGGGGGTCGCTTGGGTACTGAGCTGATCCTCGGTAGCTTCACGCTTGGTACTGGGCAGTTCCGCTTCCCGGTTGCTGGCAACGCTCTACGACAACAGGTTTCCATCGTCAGCTCCAACCCGAACCCACTCAACGTGATCGGATGCGGCTGGGAAGGGAACTACATTCGCCGGTCTTCCGGTATCTAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
7358e8130682d3e984be81edcb5701e9886bd7463e5b064c38563c72b55c686a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8857
Evidence 0,8857
Download PDB

Literature

Title Authors Date PMID Source
Isolation of lytic bacteriophages infecting Pseudomonas strains for biocontrol of fish and shrimp spoilage during chilled storage Yang,Z., Tao,X., Gao,L. and Rao,S. 2022 — GenBank